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Entry version 32 (18 Sep 2019)
Sequence version 1 (03 Sep 2014)
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Protein

Peroxidase

Gene

TCM_030283

Organism
Theobroma cacao (Cacao) (Cocoa)
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

<p>This subsection of the ‘Function’ section provides information relevant to cofactors. A cofactor is any non-protein substance required for a protein to be catalytically active. Some cofactors are inorganic, such as the metal atoms zinc, iron, and copper in various oxidation states. Others, such as most vitamins, are organic.<p><a href='/help/cofactor' target='_top'>More...</a></p>Cofactori

Protein has several cofactor binding sites:

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionOxidoreductase, PeroxidaseSAAS annotation
LigandHemeSAAS annotation, Iron, Metal-binding

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
PeroxidaseSAAS annotation (EC:1.11.1.7SAAS annotation)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:TCM_030283Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiTheobroma cacao (Cacao) (Cocoa)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3641 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaerosidsmalvidsMalvalesMalvaceaeByttnerioideaeTheobroma
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000026915 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 6

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Keywords - PTMi

Disulfide bondSAAS annotation

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati11 – 41PPRPROSITE-ProRule annotationAdd BLAST31
Repeati45 – 79PPRPROSITE-ProRule annotationAdd BLAST35
Repeati80 – 110PPRPROSITE-ProRule annotationAdd BLAST31
Repeati111 – 145PPRPROSITE-ProRule annotationAdd BLAST35
Repeati178 – 208PPRPROSITE-ProRule annotationAdd BLAST31
Repeati209 – 243PPRPROSITE-ProRule annotationAdd BLAST35
Repeati244 – 278PPRPROSITE-ProRule annotationAdd BLAST35
Repeati279 – 309PPRPROSITE-ProRule annotationAdd BLAST31
Repeati310 – 344PPRPROSITE-ProRule annotationAdd BLAST35
Repeati345 – 379PPRPROSITE-ProRule annotationAdd BLAST35
Repeati380 – 410PPRPROSITE-ProRule annotationAdd BLAST31
Repeati411 – 445PPRPROSITE-ProRule annotationAdd BLAST35
Repeati446 – 480PPRPROSITE-ProRule annotationAdd BLAST35
Repeati481 – 511PPRPROSITE-ProRule annotationAdd BLAST31
Repeati512 – 546PPRPROSITE-ProRule annotationAdd BLAST35
Repeati547 – 582PPRPROSITE-ProRule annotationAdd BLAST36
Repeati583 – 618PPRPROSITE-ProRule annotationAdd BLAST36
Repeati649 – 683PPRPROSITE-ProRule annotationAdd BLAST35
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini897 – 1166PEROXIDASE_4InterPro annotationAdd BLAST270

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1211 – 1230DisorderedSequence analysisAdd BLAST20

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the peroxidase family.UniRule annotation

Phylogenomic databases

Identification of Orthologs from Complete Genome Data

More...
OMAi
IFQSMAR

Family and domain databases

Conserved Domains Database

More...
CDDi
cd00693 secretory_peroxidase, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.25.40.10, 5 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR002016 Haem_peroxidase
IPR010255 Haem_peroxidase_sf
IPR002885 Pentatricopeptide_repeat
IPR000823 Peroxidase_pln
IPR033905 Secretory_peroxidase
IPR011990 TPR-like_helical_dom_sf

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00141 peroxidase, 1 hit
PF01535 PPR, 7 hits
PF13041 PPR_2, 3 hits

Protein Motif fingerprint database; a protein domain database

More...
PRINTSi
PR00458 PEROXIDASE
PR00461 PLPEROXIDASE

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF48113 SSF48113, 1 hit

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR00756 PPR, 8 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50873 PEROXIDASE_4, 1 hit
PS51375 PPR, 18 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A061GFY5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNKIRSVPTS STKSFNSIIN NLSSQGSYHE VLVTYTTMLN SSTPDSYTFP
60 70 80 90 100
SLLKACTSLN LFSIGLSVHQ QVILRGFSSD SYTASSLINF YSKFGHTKHA
110 120 130 140 150
RKVFDKTLNR DVVPWTAIIG CYGRGGDVGN AFSMLNEMRY NGVEPSPVTF
160 170 180 190 200
LSLLSGALEV AQVQALHGCA VLYGFESDIA VGNSLLNAYS KCGSIGEARG
210 220 230 240 250
LFELMDQKDK ISWNSLISGY AQLGNVEEIL QLLYAMKIEN MGPDQQTFGS
260 270 280 290 300
LVTAVAAQST LDIGRVVHGQ ILRSGFDSDA HIETALMVMY LKCGTTDAAY
310 320 330 340 350
QIFEGVSQKD VVLWTAMISG LVQNNFADKA LTVFYQMMKS RVEPSTATLT
360 370 380 390 400
SALAACAQLG SFDLGTSIHA YILRHGLTID IPVQNSLVTM YAKCGHLEQS
410 420 430 440 450
CAVFERINKR DLVSWNAIIS GCAQNDHLSK ALFFFNKMRL TLQKPDSLTA
460 470 480 490 500
VTLLQASAST GALHQGKWFH NFVIRSCLRP CILVDTALVD MYCKCGDLDA
510 520 530 540 550
AVKCFRVMSQ QDLISWSTII AGYGSHGKGE MALNMYFEFL HSGMEPNKVI
560 570 580 590 600
FLTVLSACSH NGLVDEGLSI FQSMARDFGI QPELEHRACI VDLLCRAGRV
610 620 630 640 650
EEAYNFYKGN FSEPAVDVLS ILLDACRAND NLELGDVIAQ DVIRLRPASA
660 670 680 690 700
ANYVQIAHCY ASMSRWNSVG EAWSQMRSLG LRKLPGWSFI DLHGTVTSFL
710 720 730 740 750
SGQNAHPKHE EIVATLKTLS WEMSEVCMNF KMHQILDIFL ETQSILNASE
760 770 780 790 800
CIHLVKTEQQ QDSRTQLFNF REQGENREMK MTLEHNKSGD NGKAMRLGVC
810 820 830 840 850
SGQLQPMQPT ATVDFCNRRL LFATVGHANW PRRLIGFALG GTPSLPNRSN
860 870 880 890 900
NWPVIVLVFM DGGKTGGGKE RMRNTCFMLL LGTALGVGIL VGVCKAQLAY
910 920 930 940 950
DYYKYSCPNV ENIARKVMLG VVLTDPTAPA AFLRLLFHDC QVQGCDASIL
960 970 980 990 1000
LDSGALKGNS EVVSGRNFGI RKLETIEYIK YILEAVCPGQ VSCADIIALA
1010 1020 1030 1040 1050
AKESVSLSGG PNIQIPLGRK DSTTCSRQAA DTHLPSPDIT VDQLLNIFMS
1060 1070 1080 1090 1100
KGLNLEESVA IMGGHTVGGG HCINIAGRLY GRHPDDPMNP GFEGLLRLYC
1110 1120 1130 1140 1150
PTKTPLANLT IVPNDKTPLI FDNLYFRDVL MGKGLFTVDS SISRDPRTAP
1160 1170 1180 1190 1200
IVRQFAANVN HFFQLFCVYD SVVYQQNFSR HSACHPTFIL EVDELRVRVV
1210 1220 1230 1240 1250
QEIVIADHEE LPNNAEASKG PTTPSLKRRM AAPRENFLAN KKQGTDVELV
Length:1,250
Mass (Da):137,508
Last modified:September 3, 2014 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i67F90D7E385AF941
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CM001884 Genomic DNA Translation: EOY28770.1

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM001884 Genomic DNA Translation: EOY28770.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

OMAiIFQSMAR

Family and domain databases

CDDicd00693 secretory_peroxidase, 1 hit
Gene3Di1.25.40.10, 5 hits
InterProiView protein in InterPro
IPR002016 Haem_peroxidase
IPR010255 Haem_peroxidase_sf
IPR002885 Pentatricopeptide_repeat
IPR000823 Peroxidase_pln
IPR033905 Secretory_peroxidase
IPR011990 TPR-like_helical_dom_sf
PfamiView protein in Pfam
PF00141 peroxidase, 1 hit
PF01535 PPR, 7 hits
PF13041 PPR_2, 3 hits
PRINTSiPR00458 PEROXIDASE
PR00461 PLPEROXIDASE
SUPFAMiSSF48113 SSF48113, 1 hit
TIGRFAMsiTIGR00756 PPR, 8 hits
PROSITEiView protein in PROSITE
PS50873 PEROXIDASE_4, 1 hit
PS51375 PPR, 18 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A061GFY5_THECC
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A061GFY5
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: September 3, 2014
Last sequence update: September 3, 2014
Last modified: September 18, 2019
This is version 32 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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