Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

AP2/ERF domain-containing transcription factor, putative

Gene

TCM_008066

Organism
Theobroma cacao (Cacao) (Cocoa)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi246 – 303AP2/ERFPROSITE-ProRule annotationAdd BLAST58

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
AP2/ERF domain-containing transcription factor, putativeImported
Gene namesi
ORF Names:TCM_008066Imported
OrganismiTheobroma cacao (Cacao) (Cocoa)Imported
Taxonomic identifieri3641 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsMalvalesMalvaceaeByttnerioideaeTheobroma
Proteomesi
  • UP000026915 Componenti: Chromosome 2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini246 – 303AP2/ERFInterPro annotationAdd BLAST58

Phylogenomic databases

OMAiIRSPERQ

Family and domain databases

CDDicd00018 AP2, 1 hit
Gene3Di3.30.730.10, 1 hit
InterProiView protein in InterPro
IPR001471 AP2/ERF_dom
IPR036955 AP2/ERF_dom_sf
IPR016177 DNA-bd_dom_sf
PfamiView protein in Pfam
PF00847 AP2, 1 hit
PRINTSiPR00367 ETHRSPELEMNT
SMARTiView protein in SMART
SM00380 AP2, 1 hit
SUPFAMiSSF54171 SSF54171, 1 hit
PROSITEiView protein in PROSITE
PS51032 AP2_ERF, 1 hit

Sequencei

Sequence statusi: Complete.

A0A061E417-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGSRILKSAS RCLVLSMAAA KNSGKSKKGV VDETEKMTTS QDWEIDKGKD
60 70 80 90 100
LDFGFERRQW KPVFDEAFMS QRPLKKIRSP ERQDPVQSSV SLAHQSSSFS
110 120 130 140 150
APSSVSTSSP SSLTLFPPSS SSSSNATLPS SRLVFPFAFD ASQQPMHFPQ
160 170 180 190 200
QYGNTPTLMP IFRPPQNQQH MISFSPQQQQ HGFVYPPFFA GESTLPPQQQ
210 220 230 240 250
QQQLLQYWSD ALNLSPRGRM MMMSRLGQDG RQLFRPPVQP INTTKLYRGV
260 270 280 290 300
RQRHWGKWVA EIRLPRNRTR LWLGTFDTAE DAALAYDREA FKLRGENARL
310 320 330 340 350
NFPELFLNKD KDTSTAPSST VSSPQTPRES SKPNQNQNLP QQEQEGLNLQ
360 370 380 390 400
SAKIEMMPPP AQPQGDNPDS DSGLGSSEAT ASDEVQMTAE GSGAGEGVSG
410 420 430 440 450
SQELVWGDMA EAWFNAIPAG WGPGSPVWDD LDTTNNLLIP SNLPFANQNQ
460 470 480
QDLSDSDIQK QQDSCASSSS TSCPMKPFFW KDQD
Length:484
Mass (Da):53,734
Last modified:September 3, 2014 - v1
Checksum:i93BC846C11ACD79F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM001880 Genomic DNA Translation: EOX99382.1

Genome annotation databases

EnsemblPlantsiEOX99382; EOX99382; TCM_008066
GrameneiEOX99382; EOX99382; TCM_008066

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM001880 Genomic DNA Translation: EOX99382.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiEOX99382; EOX99382; TCM_008066
GrameneiEOX99382; EOX99382; TCM_008066

Phylogenomic databases

OMAiIRSPERQ

Family and domain databases

CDDicd00018 AP2, 1 hit
Gene3Di3.30.730.10, 1 hit
InterProiView protein in InterPro
IPR001471 AP2/ERF_dom
IPR036955 AP2/ERF_dom_sf
IPR016177 DNA-bd_dom_sf
PfamiView protein in Pfam
PF00847 AP2, 1 hit
PRINTSiPR00367 ETHRSPELEMNT
SMARTiView protein in SMART
SM00380 AP2, 1 hit
SUPFAMiSSF54171 SSF54171, 1 hit
PROSITEiView protein in PROSITE
PS51032 AP2_ERF, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A061E417_THECC
AccessioniPrimary (citable) accession number: A0A061E417
Entry historyiIntegrated into UniProtKB/TrEMBL: September 3, 2014
Last sequence update: September 3, 2014
Last modified: September 12, 2018
This is version 28 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again