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Protein
Submitted name:

C-type cytochrome biogenesis protein CcmF

Gene

ccmF

Organism
Escherichia coli
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLyaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
C-type cytochrome biogenesis protein CcmFImported
Submitted name:
Cytochrome C biogenesis protein CcmFImported
Submitted name:
Cytochrome c heme lyase subunit CcmFImported
Submitted name:
Cytochrome c-type biogenesis protein CcmFImported
Submitted name:
Heme lyase, CcmF subunitImported
Gene namesi
Name:ccmFImported
Synonyms:ccmF_2Imported
ORF Names:ACN77_21425Imported, ACU57_17340Imported, ACU90_06635Imported, AM266_05730Imported, AUQ13_05230Imported, BK334_03005Imported, BMR26_22255Imported, BMT91_23975Imported, BUE81_18320Imported, BVL39_16370Imported, BW690_25680Imported, C2U48_23435Imported, C4J69_21400Imported, C5715_06610Imported, C7235_08515Imported, CA593_16225Imported, CDL37_03135Imported, CR534_08235Imported, CRM83_01710Imported, CSB64_18100Imported, CU078_24785Imported, EC1094V2_1486Imported, EC3234A_43c00170Imported, ECONIH1_12855Imported, EL75_1437Imported, EL79_1446Imported, EL80_1468Imported, MS6198_25260Imported, PGD_01028Imported, RK56_005970Imported, SK85_02445Imported, WR15_09345Imported
OrganismiEscherichia coliImported
Taxonomic identifieri562 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000237650 Componenti: Unassembled WGS sequence
  • UP000230908 Componenti: Chromosome
  • UP000236496 Componenti: Unassembled WGS sequence
  • UP000030018 Componenti: Unassembled WGS sequence
  • UP000030000 Componenti: Unassembled WGS sequence
  • UP000030317 Componenti: Chromosome
  • UP000188724 Componenti: Unassembled WGS sequence
  • UP000224973 Componenti: Unassembled WGS sequence
  • UP000070045 Componenti: Unassembled WGS sequence
  • UP000234324 Componenti: Chromosome
  • UP000050307 Componenti: Unassembled WGS sequence
  • UP000214591 Componenti: Unassembled WGS sequence
  • UP000037564 Componenti: Unassembled WGS sequence
  • UP000184459 Componenti: Unassembled WGS sequence
  • UP000094504 Componenti: Chromosome
  • UP000234906 Componenti: Chromosome
  • UP000036012 Componenti: Unassembled WGS sequence
  • UP000222984 Componenti: Unassembled WGS sequence
  • UP000236587 Componenti: Chromosome
  • UP000051850 Componenti: Unassembled WGS sequence
  • UP000186204 Componenti: Unassembled WGS sequence
  • UP000220282 Componenti: Unassembled WGS sequence
  • UP000186169 Componenti: Unassembled WGS sequence
  • UP000050556 Componenti: Unassembled WGS sequence
  • UP000188855 Componenti: Unassembled WGS sequence
  • UP000233768 Componenti: Chromosome iv
  • UP000029988 Componenti: Unassembled WGS sequence
  • UP000239819 Componenti: Unassembled WGS sequence
  • UP000245030 Componenti: Chromosome
  • UP000077380 Componenti: Unassembled WGS sequence
  • UP000194199 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei6 – 29HelicalSequence analysisAdd BLAST24
Transmembranei41 – 62HelicalSequence analysisAdd BLAST22
Transmembranei96 – 114HelicalSequence analysisAdd BLAST19
Transmembranei121 – 142HelicalSequence analysisAdd BLAST22
Transmembranei178 – 198HelicalSequence analysisAdd BLAST21
Transmembranei210 – 230HelicalSequence analysisAdd BLAST21
Transmembranei250 – 267HelicalSequence analysisAdd BLAST18
Transmembranei274 – 294HelicalSequence analysisAdd BLAST21
Transmembranei314 – 332HelicalSequence analysisAdd BLAST19
Transmembranei353 – 374HelicalSequence analysisAdd BLAST22
Transmembranei394 – 412HelicalSequence analysisAdd BLAST19
Transmembranei424 – 444HelicalSequence analysisAdd BLAST21
Transmembranei450 – 472HelicalSequence analysisAdd BLAST23
Transmembranei484 – 503HelicalSequence analysisAdd BLAST20
Transmembranei609 – 629HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini89 – 296Cytochrom_C_asmInterPro annotationAdd BLAST208
Domaini316 – 630CcmF_CInterPro annotationAdd BLAST315

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105DA4 Bacteria
COG1138 LUCA
OMAiLILGGWT

Family and domain databases

InterProiView protein in InterPro
IPR032523 CcmF_C
IPR002541 Cyt_c_assembly
IPR003567 Cyt_c_biogenesis
IPR003568 Cyt_c_biogenesis_CcmF
PfamiView protein in Pfam
PF16327 CcmF_C, 1 hit
PF01578 Cytochrom_C_asm, 1 hit
PRINTSiPR01410 CCBIOGENESIS
PR01411 CCMFBIOGNSIS
TIGRFAMsiTIGR00353 nrfE, 1 hit

Sequencei

Sequence statusi: Complete.

A0A037Y7B1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMPEIGNGLL CLALGIALLL SVYPLWGVAR GDARMMASSR LFAWLLFMSV
60 70 80 90 100
AGAFLVLVNA FVVNDFTVTY VASNSNTQLP VWYRVAATWG AHEGSLLLWV
110 120 130 140 150
LLMSGWTFAV AIFSQRIPLD IVARVLAIMG MVSVGFLLFI LFTSNPFSRT
160 170 180 190 200
LPNFPIEGRD LNPLLQDPGL IFHPPLLYMG YVGFSVAFAF AIASLLSGRL
210 220 230 240 250
DSTYARFTRP WTLAAWIFLT LGIVLGSAWA YYELGWGGWW FWDPVENASF
260 270 280 290 300
MPWLVGTALM HSLAVTEQRA SFKAWTLLLA ISAFSLCLLG TFLVRSGVLV
310 320 330 340 350
SVHAFASDPA RGMFILAFMV LVIGGSLLLF AARGHKVRSR VNNALWSRES
360 370 380 390 400
LLLANNVLLV AAMLVVLLGT LLPLVHKQLG LGSISIGEPF FNTMFTWLMV
410 420 430 440 450
PFALLLGVGP LVRWGRDRPR KIRNLLIIAF ISTLVLSLLL PWLFESKVVA
460 470 480 490 500
MTVLGLAMAC WIAVLAIAEA ALRISRGTKT TFSYWGMVAA HLGLAVTIVG
510 520 530 540 550
IAFSQNYSVE RDVRMKSGDS VDIHEYRFTF RDVKEVTGPN WRGGVATIGV
560 570 580 590 600
TRDGKPETVL YAEKRYYNTA GSMMTEAAID GGITRDLYAA LGEELENGAW
610 620 630 640
AVRLYYKPFV RWIWAGGLMM ALGGLLCLFD PRYRKRVSPQ KTAPEAV
Length:647
Mass (Da):71,389
Last modified:July 9, 2014 - v1
Checksum:i162316A1ED156DA8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP009859 Genomic DNA Translation: AIX64071.1
CP015834 Genomic DNA Translation: AOM70627.1
CP021175 Genomic DNA Translation: ARR34538.1
CP024821 Genomic DNA Translation: ATX11655.1
CP024127 Genomic DNA Translation: AUK21150.1
CP019051 Genomic DNA Translation: AUL69589.1
CP026202 Genomic DNA Translation: AUV33384.1
CP029242 Genomic DNA Translation: AWJ98713.1
HG976952 Genomic DNA Translation: CDU37957.1
JPKH01000010 Genomic DNA Translation: KGM70484.1
JPKL01000028 Genomic DNA Translation: KGM82086.1
JPMZ01000010 Genomic DNA Translation: KGM83795.1
LEUM01000015 Genomic DNA Translation: KLX96759.1
LGZN01000022 Genomic DNA Translation: KNF70214.1
LDYI01000116 Genomic DNA Translation: KPO09528.1
LECN01000042 Genomic DNA Translation: KPO56649.1
LIVE01000007 Genomic DNA Translation: KQJ17515.1
LOOZ01000009 Genomic DNA Translation: KXR92884.1
LCVH01000043 Genomic DNA Translation: OAC43604.1
MOIL01000006 Genomic DNA Translation: OJP15757.1
LGMU01000129 Genomic DNA Translation: OKU08830.1
MSEK01000129 Genomic DNA Translation: OLR85948.1
MTKH01000271 Genomic DNA Translation: ONG23778.1
MPAF01000075 Genomic DNA Translation: OOK24274.1
NIIS01000002 Genomic DNA Translation: OXK53859.1
PDEE01000004 Genomic DNA Translation: PEH96885.1
MPIE01000048 Genomic DNA Translation: PGF94409.1
PEDQ01000037 Genomic DNA Translation: PHX00036.1
JWSO02000009 Genomic DNA Translation: PNP00248.1
PSSV01000017 Genomic DNA Translation: PPI89850.1
PUQC01000097 Genomic DNA Translation: PQP31434.1
LT883142 Genomic DNA Translation: SMZ44582.1
RefSeqiWP_000982447.1, NZ_QBRX01000001.1

Genome annotation databases

EnsemblBacteriaiAIX64071; AIX64071; ECONIH1_12855
ANP18926; ANP18926; GJ12_14575
AOM70627; AOM70627; MS6198_25260
AOT32142; AOT32142; FORC31_1679
CDU37957; CDU37957; PGD_01028
CTX61709; CTX61709; ERS139266_00388
KGM70484; KGM70484; EL75_1437
KGM82086; KGM82086; EL80_1468
KGM83795; KGM83795; EL79_1446
KHH08704; KHH08704; PU69_12435
KIG80777; KIG80777; PU38_12665
KIH37677; KIH37677; PD07_03230
KLX96759; KLX96759; SK85_02445
KNF70214; KNF70214; WR15_09345
KPO09528; KPO09528; ACU57_17340
KPO56649; KPO56649; ACU90_06635
KQJ17515; KQJ17515; AM266_05730
KXQ37488; KXQ37488; AUQ01_20175
OAC43604; OAC43604; EC3234A_43c00170
PATRICifig|562.10476.peg.209

Similar proteinsi

Entry informationi

Entry nameiA0A037Y7B1_ECOLX
AccessioniPrimary (citable) accession number: A0A037Y7B1
Entry historyiIntegrated into UniProtKB/TrEMBL: July 9, 2014
Last sequence update: July 9, 2014
Last modified: July 18, 2018
This is version 43 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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