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UniProtKB - A0A037UTX9 (A0A037UTX9_9RHIZ)

Entry version 29 (07 Oct 2020)
Sequence version 1 (09 Jul 2014)
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Protein

Blue-light-activated histidine kinase

Gene

T281_13645

Organism
Rhodomicrobium udaipurense JA643
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

  • ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.ARBA annotation EC:2.7.13.3

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section is used for enzymes and indicates the residues directly involved in catalysis.<p><a href='/help/act_site' target='_top'>More...</a></p>Active sitei69PROSITE-ProRule annotation1
Active sitei96PROSITE-ProRule annotation1
Active sitei188PROSITE-ProRule annotation1

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Complete GO annotation on QuickGO ...

GO - Biological processi

Complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionHydrolasePROSITE-ProRule annotation, MethyltransferaseImported, Transferase
Biological processChemotaxisPROSITE-ProRule annotation
LigandFlavoprotein, FMNARBA annotation

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Blue-light-activated histidine kinaseARBA annotation (EC:2.7.13.3ARBA annotation)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:T281_13645Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiRhodomicrobium udaipurense JA643Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri858455 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Hyphomicrobiaceae › Rhodomicrobium ›
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000026572 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

GO - Cellular componenti

Complete GO annotation on QuickGO ...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini57 – 241CheB-type methylesteraseInterPro annotationAdd BLAST185
Domaini265 – 530CheR-type methyltransferaseInterPro annotationAdd BLAST266
Domaini845 – 896PACInterPro annotationAdd BLAST52
Domaini893 – 963PASInterPro annotationAdd BLAST71
Domaini966 – 1018PACInterPro annotationAdd BLAST53

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni26 – 61DisorderedSequence analysisAdd BLAST36
Regioni531 – 562DisorderedSequence analysisAdd BLAST32
Regioni729 – 748DisorderedSequence analysisAdd BLAST20

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi543 – 557PolarSequence analysisAdd BLAST15

Family and domain databases

Conserved Domains Database

More...CDDi		cd00130, PAS, 2 hits

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		3.30.565.10, 1 hit
3.40.50.180, 1 hit

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR035909, CheB_C
IPR022642, CheR_C
IPR000780, CheR_MeTrfase
IPR022641, CheR_N
IPR036890, HATPase_C_sf
IPR001610, PAC
IPR000014, PAS
IPR000700, PAS-assoc_C
IPR035965, PAS-like_dom_sf
IPR013767, PAS_fold
IPR029063, SAM-dependent_MTases
IPR011102, Sig_transdc_His_kinase_HWE
IPR000673, Sig_transdc_resp-reg_Me-estase

Pfam protein domain database

More...Pfami		View protein in Pfam
PF01339, CheB_methylest, 1 hit
PF01739, CheR, 1 hit
PF03705, CheR_N, 1 hit
PF07536, HWE_HK, 1 hit
PF00989, PAS, 1 hit

Protein Motif fingerprint database; a protein domain database

More...PRINTSi		PR00996, CHERMTFRASE

Simple Modular Architecture Research Tool; a protein domain database

More...SMARTi		View protein in SMART
SM00911, HWE_HK, 1 hit
SM00138, MeTrc, 1 hit
SM00086, PAC, 2 hits
SM00091, PAS, 2 hits

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF52738, SSF52738, 1 hit
SSF53335, SSF53335, 1 hit
SSF55785, SSF55785, 2 hits

TIGRFAMs; a protein family database

More...TIGRFAMsi		TIGR00229, sensory_box, 1 hit

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS50122, CHEB, 1 hit
PS50123, CHER, 1 hit
PS50113, PAC, 2 hits
PS50112, PAS, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A037UTX9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSHDALALIL GEIHLKILRP IIMTEHKPRR KNGGGASNKA PPVSKGGDAL 
        60         70         80         90        100
RAPRNENTSS PLIVGVGASA GGLEAFTAFF ENMPPDSGMA FVLVQHLAPD 
       110        120        130        140        150
HKSMLAEILG KTTAMPVTEA ADGTEVLPNQ VFVIPPDATL TIANGRFVVV 
       160        170        180        190        200
KPAPPREVRR PIDTFMFSLA RDQGENAVCV ILSGTGSDGS LGLGSIKEHG 
       210        220        230        240        250
GLTIAQAEVD HQAKLGMPRS AAATGFVDHV LQVKDIPAKL LDYHRHLAQA 
       260        270        280        290        300
KAHKNAEGIR KDAVEHLAEI ATLLHSAVGH DFSEYKEKTF VRRVQRRMQV 
       310        320        330        340        350
LNLDSMNGYL EELRGNPKEL ELLFRDLLIG VTQFFRDPAA FEALEAKVIP 
       360        370        380        390        400
ALIAGRGADD QVRVWVAGCA TGEEAYSIAI LLMEAVAKLP SAPRIMIFAT 
       410        420        430        440        450
DIDDRAIAHA RAGRYPGALL DAVSPQRLER WFVREGNHYA VSSELRESIV 
       460        470        480        490        500
FSVHSVLRDP PFSKLDLISC RNLLIYLDTA LQDRLIPIFH YALRPGGYVF 
       510        520        530        540        550
LGPSESIARQ EHFFTEVDKK HRLFERRNDT PAALPSLPLS SAASRGMAPS 
       560        570        580        590        600
SAGTPNRRAA ESGVERGARR VMERYAPAHL LVDQKHQVLS FSGQTGKYLD 
       610        620        630        640        650
PQPGAASFNL FNLIQNALRP AARSLFQKAA ATGLRAVQEN VAIEVAGKSD 
       660        670        680        690        700
SINLIVEPVL PASGKATHYI MIFQDIEPPK EPAEVPDMED RGIGSRELEA 
       710        720        730        740        750
ELRAIRARLQ AALDEAEQAN EDLKSANEEY QSLNEELQSS NEELETSKEE 
       760        770        780        790        800
MQSINEELQT VNNELSEKNT SLHRLNSDLQ NLLESTDIAI LFLDDALCVR 
       810        820        830        840        850
TFTAACTKLF HLREADRGRP VIEIASRLSY HAIEADVRSA LAALSVVERE 
       860        870        880        890        900
VHTPDNGTTF LMRIRPYRTL NGVVDGVVIT FVDISEQKRH QETLARLAAI 
       910        920        930        940        950
VESSDDAIIG HSLEGVISSW NRGAEKIFAY TAEEIAGKPL SLLVAAGDKD 
       960        970        980        990       1000
EMPGVLERVK TGEAVQSYET LLAAKDGQRI HISLTVSPVR NADGSIIAAS 
      1010       1020       1030       1040       1050
IVARDVSERV RSERQRDLLM KELDHRTKNT LSTVLAISRE TARYATTLAE 
      1060       1070       1080       1090       1100
FGDAFQARLL ALSKTHNLLT ASHWEGASLR RIFALELSPY GREGAEPRFA 
      1110       1120       1130       1140       1150
LDGETVNLSP GQALMLGMAV HELTTNAAKY GALSTQSGRV DVTWSVDRAE 
      1160       1170       1180       1190       1200
TEDLLRLRWV ESGGPPVKPP TRQGFGSHLI EKGLSLETRG EVCMDFAPTG 
      1210 
LRCAIAIPLK RAEN
Length:1,214
Mass (Da):132,730
Last modified:July 9, 2014 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iFC8BEF3D4AFCA386
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
JFZJ01000100 Genomic DNA Translation: KAI93961.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...EnsemblBacteriai		KAI93961; KAI93961; T281_13645

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JFZJ01000100 Genomic DNA Translation: KAI93961.1

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

SWISS-MODEL Interactive Workspace

More...SWISS-MODEL-Workspacei		Submit a new modelling project...

Genome annotation databases

EnsemblBacteriaiKAI93961; KAI93961; T281_13645

Family and domain databases

CDDicd00130, PAS, 2 hits
Gene3Di3.30.565.10, 1 hit
3.40.50.180, 1 hit
InterProiView protein in InterPro
IPR035909, CheB_C
IPR022642, CheR_C
IPR000780, CheR_MeTrfase
IPR022641, CheR_N
IPR036890, HATPase_C_sf
IPR001610, PAC
IPR000014, PAS
IPR000700, PAS-assoc_C
IPR035965, PAS-like_dom_sf
IPR013767, PAS_fold
IPR029063, SAM-dependent_MTases
IPR011102, Sig_transdc_His_kinase_HWE
IPR000673, Sig_transdc_resp-reg_Me-estase
PfamiView protein in Pfam
PF01339, CheB_methylest, 1 hit
PF01739, CheR, 1 hit
PF03705, CheR_N, 1 hit
PF07536, HWE_HK, 1 hit
PF00989, PAS, 1 hit
PRINTSiPR00996, CHERMTFRASE
SMARTiView protein in SMART
SM00911, HWE_HK, 1 hit
SM00138, MeTrc, 1 hit
SM00086, PAC, 2 hits
SM00091, PAS, 2 hits
SUPFAMiSSF52738, SSF52738, 1 hit
SSF53335, SSF53335, 1 hit
SSF55785, SSF55785, 2 hits
TIGRFAMsiTIGR00229, sensory_box, 1 hit
PROSITEiView protein in PROSITE
PS50122, CHEB, 1 hit
PS50123, CHER, 1 hit
PS50113, PAC, 2 hits
PS50112, PAS, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A037UTX9_9RHIZ
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A037UTX9
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: July 9, 2014
Last sequence update: July 9, 2014
Last modified: October 7, 2020
This is version 29 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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