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Protein
Submitted name:

C-di-GMP phosphodiesterase

Gene

BY96_23160

Organism
Escherichia coli O111:NM str. K6722
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
C-di-GMP phosphodiesteraseImported
Gene namesi
ORF Names:BY96_23160Imported
OrganismiEscherichia coli O111:NM str. K6722Imported
Taxonomic identifieri1446533 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000024307 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Structurei

3D structure databases

ProteinModelPortaliA0A027TH73
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini17 – 64PASInterPro annotationAdd BLAST48
Domaini134 – 178PASInterPro annotationAdd BLAST45
Domaini208 – 260PACInterPro annotationAdd BLAST53
Domaini402 – 532GGDEFInterPro annotationAdd BLAST131
Domaini541 – 795EALInterPro annotationAdd BLAST255

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili457 – 477Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

CDDicd01948 EAL, 1 hit
cd01949 GGDEF, 1 hit
cd00130 PAS, 2 hits
Gene3Di3.20.20.450, 1 hit
InterProiView protein in InterPro
IPR012226 Diguanyl_cyclase/Pdiesterase
IPR001633 EAL_dom
IPR035919 EAL_sf
IPR000160 GGDEF_dom
IPR029787 Nucleotide_cyclase
IPR001610 PAC
IPR000014 PAS
IPR000700 PAS-assoc_C
IPR035965 PAS-like_dom_sf
PfamiView protein in Pfam
PF00563 EAL, 1 hit
PF00990 GGDEF, 1 hit
PF13426 PAS_9, 2 hits
PIRSFiPIRSF005925 Dos, 3 hits
SMARTiView protein in SMART
SM00052 EAL, 1 hit
SM00267 GGDEF, 1 hit
SM00086 PAC, 2 hits
SM00091 PAS, 2 hits
SUPFAMiSSF141868 SSF141868, 1 hit
SSF55073 SSF55073, 1 hit
SSF55785 SSF55785, 2 hits
TIGRFAMsiTIGR00254 GGDEF, 1 hit
TIGR00229 sensory_box, 2 hits
PROSITEiView protein in PROSITE
PS50883 EAL, 1 hit
PS50887 GGDEF, 1 hit
PS50113 PAC, 1 hit
PS50112 PAS, 2 hits

Sequencei

Sequence statusi: Complete.

A0A027TH73-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKLTDADNAA DGIFFPALEQ NMMGAVLINE NDEVMFFNPA AEKLWGYKRE
60 70 80 90 100
EVIGNNIDML IPRDLRPAHP EYIRHNREGG KARVEGMSRE LQLEKKDGSK
110 120 130 140 150
IWTRFALSKV SAEGKVYYLA LVRDASVEMA QKEQTRQLII AVDHLDRPVI
160 170 180 190 200
VLDPERHIVQ CNRAFTEMFG YCISEASGMQ PDTLLNIPEF PADNRIRLQQ
210 220 230 240 250
LLWKTARDQD EFLLLTRTGE KIWIKASISP VYDVLAHLQN LVMTFSDITE
260 270 280 290 300
ERQIRQLEGN ILAAMCSSPP FHEMGEIICR NIESVLNESH VSLFALRNGM
310 320 330 340 350
PIHWASSSHG AEVQNAQSWS ATIRQRDGAP AGILQIKTSS GAETSAFIER
360 370 380 390 400
VADISQHMAA LALEQEKSRQ HIEQLIQFDP MTGLPNRKNL HNYLDDLVDK
410 420 430 440 450
AVSPVVYLIG VDHIQDVIDS LGYAWADQAL LEVVNRFREK LKPDQYLCRI
460 470 480 490 500
EGTQFVLVSL ENDVSNITQI ADELRNVVSK PIMIDDKPFP LTLSIGISYD
510 520 530 540 550
VGKNRDYLLS TAHNAMDYIR KNGGNGWQFF SPAMNEMVKE RLVLGAALKE
560 570 580 590 600
AISNNQLKLV YQPQIFAETG ELYGIEALAR WHDPQHGHVP PSRFIPLAEE
610 620 630 640 650
IGEIENIGRW VIAEACRQLA EWRSQNIHIP ALSVNLSALH FRSNQLPNQV
660 670 680 690 700
SDAMQAWGID GHQLTVEITE SMMMEHDTEI FKRIQILRDM GVGLSVDDFG
710 720 730 740 750
TGFSGLSRLV SLPVTEIKID KSFVDRCLTE KRILALLEAI TSIGQSLNLT
760 770 780 790
VVAEGVEIKE QFEMLRKIHC RVIQGYFFSR PLPAEEIPGW MSSVLPLKI
Length:799
Mass (Da):90,264
Last modified:July 9, 2014 - v1
Checksum:i7FC5431F53C003E0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JHHU01000070 Genomic DNA Translation: EZD24559.1
RefSeqiWP_001425964.1, NZ_JHHU01000070.1

Genome annotation databases

EnsemblBacteriaiEZD24559; EZD24559; BY96_23160

Similar proteinsi

Entry informationi

Entry nameiA0A027TH73_ECOLX
AccessioniPrimary (citable) accession number: A0A027TH73
Entry historyiIntegrated into UniProtKB/TrEMBL: July 9, 2014
Last sequence update: July 9, 2014
Last modified: December 20, 2017
This is version 21 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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