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Protein
Submitted name:

Protein rtcB

Gene

rtcB

Organism
Escherichia coli
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Protein rtcBImported (EC:6.5.1.-Imported)
Submitted name:
RNA ligaseImported
Submitted name:
RNA-splicing ligaseImported
Submitted name:
RNA-splicing ligase RtcBImported
Gene namesi
Name:rtcBImported
Synonyms:rtcB_1Imported
ORF Names:AM266_07580Imported, AM464_09790Imported, AUQ13_09145Imported, BHS87_19190Imported, BK400_00475Imported, BUE81_05850Imported, BVL39_08980Imported, BW690_17685Imported, C4J69_02735Imported, C5N07_12295Imported, C7235_02080Imported, CA593_09100Imported, DNQ41_23010Imported, EC3234A_57c00810Imported, ERS085365_00903Imported, ERS085416_02808Imported, ERS139211_00113Imported, ERS150873_03611Imported, NCTC10650_00969Imported, NCTC13462_03978Imported, PGD_00464Imported, RK56_020770Imported, SAMEA3472039_00451Imported, SAMEA3472053_00143Imported, SAMEA3472064_02770Imported, SAMEA3472067_03411Imported, SAMEA3472078_02286Imported, SAMEA3472113_00534Imported, SAMEA3472119_02245Imported, SAMEA3484419_02157Imported, SAMEA3484423_00949Imported, SAMEA3484427_00081Imported, SAMEA3484429_02852Imported, SAMEA3484436_03079Imported, SAMEA3484444_03343Imported, SAMEA3484448_02454Imported, SAMEA3485084_02381Imported, SAMEA3485115_03531Imported, SAMEA3751242_01295Imported, SAMEA3752378_01653Imported, SAMEA3752558_03551Imported, SAMEA3752560_02003Imported, SAMEA3753070_02100Imported, SAMEA3753074_01846Imported, SAMEA3753092_00549Imported, SAMEA3753097_01449Imported, SAMEA3753098_02463Imported, SAMEA3753105_03476Imported, SAMEA3753106_01860Imported, SAMEA3753300_02346Imported, SAMEA3753303_02800Imported, SK85_03735Imported
OrganismiEscherichia coliImported
Taxonomic identifieri562 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4105E0Y Bacteria
COG1690 LUCA

Family and domain databases

Gene3Di3.90.1860.10, 1 hit
InterProiView protein in InterPro
IPR001233 RtcB
IPR036025 RtcB-like_sf
PfamiView protein in Pfam
PF01139 RtcB, 1 hit
SUPFAMiSSF103365 SSF103365, 1 hit
PROSITEiView protein in PROSITE
PS01288 UPF0027, 1 hit

Sequencei

Sequence statusi: Complete.

A0A024L005-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNYELLTTEN APVKMWTKGV PVEADARQQL INTAKMPFIF KHIAVMPDVH
60 70 80 90 100
LGKGSTIGSV IPTKGAIIPA AVGVDIGCGM NALRTALTAE DLPENLAELR
110 120 130 140 150
QAIETAVPHG RTTGRCKRDK GAWENPPVNV DAKWAELEAG YQWLTQKYPR
160 170 180 190 200
FLNTNNYKHL GTLGTGNHFI EICLDESDQV WIMLHSGSRG IGNAIGTYFI
210 220 230 240 250
DLAQKEMQET LETLPSRDLA YFMEGTEYFD DYLKAVAWAQ LFASLNRDAM
260 270 280 290 300
MENVVTALQS ITQKTVRQPQ TLAMEEINCH HNYVQKEQHF GEEIYVTRKG
310 320 330 340 350
AVSARAGQYG IIPGSMGAKS FIVRGLGNEE SFCSCSHGAG RVMSRTKAKK
360 370 380 390 400
LFSVEDQIRA TAHVECRKDA EVIDEIPMAY KDIDAVMAAQ SDLVEVIYTL

RQVVCVKG
Length:408
Mass (Da):45,222
Last modified:July 9, 2014 - v1
Checksum:iC0C33BA04542185F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP021175 Genomic DNA Translation: ARR33248.1
CP019051 Genomic DNA Translation: AUL68273.1
CP029242 Genomic DNA Translation: AWJ97552.1
CP029741 Genomic DNA Translation: AWS63171.1
CP029973 Genomic DNA Translation: AWV12901.1
HG976950 Genomic DNA Translation: CDU37429.1
CYAQ01000005 Genomic DNA Translation: CTS07572.1
CYDH01000001 Genomic DNA Translation: CTU93236.1
CYCX01000021 Genomic DNA Translation: CTW20344.1
CYFX01000028 Genomic DNA Translation: CTZ66799.1
LEUM01000020 Genomic DNA Translation: KLX94354.1
LIVE01000009 Genomic DNA Translation: KQJ17118.1
LOOZ01000013 Genomic DNA Translation: KXR91731.1
LCVH01000057 Genomic DNA Translation: OAC42339.1
MOKZ01000001 Genomic DNA Translation: OJS91507.1
MSEK01000039 Genomic DNA Translation: OLR88406.1
MTKH01000147 Genomic DNA Translation: ONG27117.1
NAFT01000070 Genomic DNA Translation: ORS99912.1
JWSO02000014 Genomic DNA Translation: PNO96392.1
PSSV01000003 Genomic DNA Translation: PPI96788.1
PUJR01000010 Genomic DNA Translation: PQP10159.1
UARY01000011 Genomic DNA Translation: SPW87974.1
UART01000010 Genomic DNA Translation: SQB52218.1
UCUD01000001 Genomic DNA Translation: SQJ67752.1
UCUG01000004 Genomic DNA Translation: SQK08718.1
UCUN01000011 Genomic DNA Translation: SQK31100.1
UCUX01000012 Genomic DNA Translation: SQK69790.1
UCVX01000008 Genomic DNA Translation: SQM05190.1
UCWJ01000013 Genomic DNA Translation: SQM64978.1
UCWW01000002 Genomic DNA Translation: SQN14111.1
UCYF01000003 Genomic DNA Translation: SQO82250.1
UCZF01000010 Genomic DNA Translation: SQP88092.1
UCZJ01000008 Genomic DNA Translation: SQQ18066.1
UCZQ01000007 Genomic DNA Translation: SQQ48142.1
UCZZ01000007 Genomic DNA Translation: SQR01879.1
UDAI01000003 Genomic DNA Translation: SQR53293.1
UDAQ01000011 Genomic DNA Translation: SQR65336.1
UDAF01000006 Genomic DNA Translation: SQS50604.1
UDAA01000014 Genomic DNA Translation: SQU12328.1
UDFU01000005 Genomic DNA Translation: SQX87737.1
UDGC01000001 Genomic DNA Translation: SQY32106.1
UDGL01000014 Genomic DNA Translation: SQZ12403.1
UDGY01000011 Genomic DNA Translation: SQZ31475.1
UDGR01000004 Genomic DNA Translation: SQZ40215.1
UDHI01000008 Genomic DNA Translation: SRA06501.1
UDHY01000014 Genomic DNA Translation: SRA81142.1
UDIH01000009 Genomic DNA Translation: SRB22319.1
UEJS01000003 Genomic DNA Translation: SRY06242.1
UEKC01000006 Genomic DNA Translation: SRY54508.1
UEJW01000006 Genomic DNA Translation: SRY63880.1
UELE01000013 Genomic DNA Translation: SRZ58636.1
UELR01000009 Genomic DNA Translation: SSA05277.1
RefSeqiWP_001105504.1, NZ_QHMK01000007.1

Genome annotation databases

EnsemblBacteriaiANM84180; ANM84180; A8V37_17380
AOT30863; AOT30863; FORC31_0394
CDU37429; CDU37429; PGD_00464
CTS07572; CTS07572; ERS085365_00903
CTU93236; CTU93236; ERS139211_00113
CTW20344; CTW20344; ERS085416_02808
CTX83969; CTX83969; ERS139235_03625
CTZ66799; CTZ66799; ERS150873_03611
KLX94354; KLX94354; SK85_03735
KQJ17118; KQJ17118; AM266_07580
KXQ42237; KXQ42237; AUQ01_02585
OAC42339; OAC42339; EC3234A_57c00810
ODH31075; ODH31075; A6803_08575
PATRICifig|562.10472.peg.3022

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP021175 Genomic DNA Translation: ARR33248.1
CP019051 Genomic DNA Translation: AUL68273.1
CP029242 Genomic DNA Translation: AWJ97552.1
CP029741 Genomic DNA Translation: AWS63171.1
CP029973 Genomic DNA Translation: AWV12901.1
HG976950 Genomic DNA Translation: CDU37429.1
CYAQ01000005 Genomic DNA Translation: CTS07572.1
CYDH01000001 Genomic DNA Translation: CTU93236.1
CYCX01000021 Genomic DNA Translation: CTW20344.1
CYFX01000028 Genomic DNA Translation: CTZ66799.1
LEUM01000020 Genomic DNA Translation: KLX94354.1
LIVE01000009 Genomic DNA Translation: KQJ17118.1
LOOZ01000013 Genomic DNA Translation: KXR91731.1
LCVH01000057 Genomic DNA Translation: OAC42339.1
MOKZ01000001 Genomic DNA Translation: OJS91507.1
MSEK01000039 Genomic DNA Translation: OLR88406.1
MTKH01000147 Genomic DNA Translation: ONG27117.1
NAFT01000070 Genomic DNA Translation: ORS99912.1
JWSO02000014 Genomic DNA Translation: PNO96392.1
PSSV01000003 Genomic DNA Translation: PPI96788.1
PUJR01000010 Genomic DNA Translation: PQP10159.1
UARY01000011 Genomic DNA Translation: SPW87974.1
UART01000010 Genomic DNA Translation: SQB52218.1
UCUD01000001 Genomic DNA Translation: SQJ67752.1
UCUG01000004 Genomic DNA Translation: SQK08718.1
UCUN01000011 Genomic DNA Translation: SQK31100.1
UCUX01000012 Genomic DNA Translation: SQK69790.1
UCVX01000008 Genomic DNA Translation: SQM05190.1
UCWJ01000013 Genomic DNA Translation: SQM64978.1
UCWW01000002 Genomic DNA Translation: SQN14111.1
UCYF01000003 Genomic DNA Translation: SQO82250.1
UCZF01000010 Genomic DNA Translation: SQP88092.1
UCZJ01000008 Genomic DNA Translation: SQQ18066.1
UCZQ01000007 Genomic DNA Translation: SQQ48142.1
UCZZ01000007 Genomic DNA Translation: SQR01879.1
UDAI01000003 Genomic DNA Translation: SQR53293.1
UDAQ01000011 Genomic DNA Translation: SQR65336.1
UDAF01000006 Genomic DNA Translation: SQS50604.1
UDAA01000014 Genomic DNA Translation: SQU12328.1
UDFU01000005 Genomic DNA Translation: SQX87737.1
UDGC01000001 Genomic DNA Translation: SQY32106.1
UDGL01000014 Genomic DNA Translation: SQZ12403.1
UDGY01000011 Genomic DNA Translation: SQZ31475.1
UDGR01000004 Genomic DNA Translation: SQZ40215.1
UDHI01000008 Genomic DNA Translation: SRA06501.1
UDHY01000014 Genomic DNA Translation: SRA81142.1
UDIH01000009 Genomic DNA Translation: SRB22319.1
UEJS01000003 Genomic DNA Translation: SRY06242.1
UEKC01000006 Genomic DNA Translation: SRY54508.1
UEJW01000006 Genomic DNA Translation: SRY63880.1
UELE01000013 Genomic DNA Translation: SRZ58636.1
UELR01000009 Genomic DNA Translation: SSA05277.1
RefSeqiWP_001105504.1, NZ_QHMK01000007.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiANM84180; ANM84180; A8V37_17380
AOT30863; AOT30863; FORC31_0394
CDU37429; CDU37429; PGD_00464
CTS07572; CTS07572; ERS085365_00903
CTU93236; CTU93236; ERS139211_00113
CTW20344; CTW20344; ERS085416_02808
CTX83969; CTX83969; ERS139235_03625
CTZ66799; CTZ66799; ERS150873_03611
KLX94354; KLX94354; SK85_03735
KQJ17118; KQJ17118; AM266_07580
KXQ42237; KXQ42237; AUQ01_02585
OAC42339; OAC42339; EC3234A_57c00810
ODH31075; ODH31075; A6803_08575
PATRICifig|562.10472.peg.3022

Phylogenomic databases

eggNOGiENOG4105E0Y Bacteria
COG1690 LUCA

Family and domain databases

Gene3Di3.90.1860.10, 1 hit
InterProiView protein in InterPro
IPR001233 RtcB
IPR036025 RtcB-like_sf
PfamiView protein in Pfam
PF01139 RtcB, 1 hit
SUPFAMiSSF103365 SSF103365, 1 hit
PROSITEiView protein in PROSITE
PS01288 UPF0027, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A024L005_ECOLX
AccessioniPrimary (citable) accession number: A0A024L005
Entry historyiIntegrated into UniProtKB/TrEMBL: July 9, 2014
Last sequence update: July 9, 2014
Last modified: October 10, 2018
This is version 48 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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