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Protein
Submitted name:

Uncharacterized protein

Gene

BN9_055670

Organism
Albugo candida
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionCalcium channelUniRule annotation, Ion channel, Voltage-gated channelUniRule annotation
Biological processCalcium transport, Ion transport, Transport
LigandCalcium

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:BN9_055670Imported
OrganismiAlbugo candidaImported
Taxonomic identifieri65357 [NCBI]
Taxonomic lineageiEukaryotaStramenopilesOomycetesAlbuginalesAlbuginaceaeAlbugo
Proteomesi
  • UP000053237 Componenti: Unassembled WGS sequence

Subcellular locationi

  • Membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei111 – 130HelicalSequence analysisAdd BLAST20
Transmembranei169 – 189HelicalSequence analysisAdd BLAST21
Transmembranei201 – 219HelicalSequence analysisAdd BLAST19
Transmembranei256 – 279HelicalSequence analysisAdd BLAST24
Transmembranei423 – 444HelicalSequence analysisAdd BLAST22
Transmembranei450 – 475HelicalSequence analysisAdd BLAST26
Transmembranei543 – 565HelicalSequence analysisAdd BLAST23
Transmembranei585 – 610HelicalSequence analysisAdd BLAST26
Transmembranei672 – 700HelicalSequence analysisAdd BLAST29
Transmembranei774 – 796HelicalSequence analysisAdd BLAST23
Transmembranei995 – 1020HelicalSequence analysisAdd BLAST26
Transmembranei1040 – 1061HelicalSequence analysisAdd BLAST22
Transmembranei1073 – 1090HelicalSequence analysisAdd BLAST18
Transmembranei1136 – 1156HelicalSequence analysisAdd BLAST21
Transmembranei1287 – 1311HelicalSequence analysisAdd BLAST25
Transmembranei1372 – 1390HelicalSequence analysisAdd BLAST19
Transmembranei1402 – 1424HelicalSequence analysisAdd BLAST23
Transmembranei1436 – 1463HelicalSequence analysisAdd BLAST28
Transmembranei1484 – 1510HelicalSequence analysisAdd BLAST27
Transmembranei1596 – 1619HelicalSequence analysisAdd BLAST24

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini112 – 485Ion_transInterPro annotationAdd BLAST374
Domaini550 – 800Ion_transInterPro annotationAdd BLAST251
Domaini1002 – 1319Ion_transInterPro annotationAdd BLAST318
Domaini1369 – 1626Ion_transInterPro annotationAdd BLAST258
Domaini1632 – 1703GPHHInterPro annotationAdd BLAST72

Sequence similaritiesi

Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family. [View classification]UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Family and domain databases

Gene3Di1.20.120.350, 4 hits
InterProiView protein in InterPro
IPR031649 GPHH_dom
IPR005821 Ion_trans_dom
IPR002077 VDCCAlpha1
IPR027359 Volt_channel_dom_sf
PfamiView protein in Pfam
PF16905 GPHH, 1 hit
PF00520 Ion_trans, 4 hits
PRINTSiPR00167 CACHANNEL

Sequencei

Sequence statusi: Complete.

A0A024GDH1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNDMSECALA ISAKIHHSDT KEASIESKST ERTPENLLST SQTSLNMNKI
60 70 80 90 100
EPKTIEANAS FRKTAPPLRN LHSFLFAQSS RSLNFAGTSL YIFTRHNCVR
110 120 130 140 150
RWCIRIATSR LLDIIVVSAI IANSAILGIT DYSVVDLHMN PTVVGYKFEN
160 170 180 190 200
GVMVEAYSQS NWIVQNSELP FTALFTVECA LKIVAMGLFR SKGAYLRDGW
210 220 230 240 250
NVLDFVVVLM SLIGIFPSIP NVSAIRTIRV LRPLRSLSMI PGMRRLISAL
260 270 280 290 300
LEALPALANV VILQLFVFLI FGILGIQLFG GLMTSRCRLT PYPIMMPVNQ
310 320 330 340 350
DGVFIWPVPP DYLANAIADP LKYQCLQEPL LSHEDRTTRF FTKETSPWRY
360 370 380 390 400
PRDCFWPINT TDEALCTFST ESGVHRCTLG NVCGSNYDTF GNPRFKNQKV
410 420 430 440 450
MQKAVYSTAF DYGYTTFDNI GKAFFTIFQA ITQEGWTVIM YMTMDTSQPV
460 470 480 490 500
LASLFFVILM IFASFFLMNL TLAVISDEFN LDDQKRQMAV PSQGSRRSSR
510 520 530 540 550
LEFSTSFSFL PSKSTNRPNP SHTSPQPTQR NRLRRYYHSI RKFAHILVSH
560 570 580 590 600
QAFSGVIMLV IMANTTVLAL DHYPMPPTLS SNLEVINFGL SCVFVVEMVL
610 620 630 640 650
KIFGLGFCMY ARDRFNLFDA FIVAMSMLEL IISPPSFLSK NRPSRGSVSA
660 670 680 690 700
LRTFRLFRVF KLARNWKSLR ELLALIIRAV AGIANFAVLL FLFIYIYALV
710 720 730 740 750
GIQFYANTMR FDADAYAVSA AHGTDLVFWN AQLPRSNFDS LLWAFVTVFQ
760 770 780 790 800
VITGENWNNV MYDAIRANGF SASIYFISLV ILGNFILMNL FLALLLDNFA
810 820 830 840 850
GKGGRDTEER QRDLQNLAKR LGPSKVAPEH TDLTHENRSG TESPEGQPAT
860 870 880 890 900
NGNTSHGQHV ARHSLVPVDD MAMPIDLEKL KPLEKNHTVE IKKRVDRFHM
910 920 930 940 950
KKLSASIQAL DEPKNLPSLD VDDPRDLFDE IVEFEKKVRD GTVEPKAVMQ
960 970 980 990 1000
MKKNKEGQSS DTFEDRWSWL LASSELPPTN TSLYFFTEKH PWRRVAFAII
1010 1020 1030 1040 1050
NHPIFDNIVL LLIAVSSVAL AVDNPLSDPS SSSAKSLKTL EKICTGIFTI
1060 1070 1080 1090 1100
EMLFKVFSLG LFMHKEAYLR NNWNVLDGII VVTSWVTLIA ESSTQVANFK
1110 1120 1130 1140 1150
FLRPLRGLRA FRPLRMISRR PGLKLVVNAL FESVPAVMNV MFVCVLFYLI
1160 1170 1180 1190 1200
FSIIAVNNLK GTFYECTGKV FDQLSQPQLK FLTIPSPWKE LSNEQKNWFE
1210 1220 1230 1240 1250
NTTCHGFTTF EPYPDASDLT RITSRYVCEC WGASWEPPIP WNFNNIGWAM
1260 1270 1280 1290 1300
LTFFELSTTE GWVTVMTQAI DATDIDMQPI RDNQMKWAYF FVVFNLVGSF
1310 1320 1330 1340 1350
FVVNLFVGVI IDNFNRMKAA LGGDFMLTPE QKKWIEAQKA ALRIGPVRAV
1360 1370 1380 1390 1400
KVPKNKYRKW IHTIVRASGF EWFSMICIII NTLLMAAQYF GEATLQLRVV
1410 1420 1430 1440 1450
NWINEIFAGV FTMEALMKGV AYGSNYFEDA WNRFDFFVVG GTLLSVIVEA
1460 1470 1480 1490 1500
VTGTSVRSMA MLIRVFRVTR IMRLIKASKS IQQILTTLYV ALPGLSNVAS
1510 1520 1530 1540 1550
ILFLMLFIYA TMGVQLFAKV AHGDNVDDHA NFQGFWTAIL LLLRSATGEA
1560 1570 1580 1590 1600
WDALMHDYAT KTPGCVSDPS FNASMCGFHN FDGCIPLNGC GNPIAYIYFC
1610 1620 1630 1640 1650
TFTLLVTYVM LNLTIAIILE GFSSSQIDEE PIFEPALLLE FRTKWSWIDP
1660 1670 1680 1690 1700
KAVGYIRVQA LCILANILGP PLGIANKKMN RNQFVRYTNS LYLPLYEDEM
1710 1720 1730 1740 1750
IHFRDVLLAM TRELVKENLS KNAQDISEVG VCHADETTRR RLDFHAHDYF
1760 1770 1780 1790 1800
AISRIQHAVL RWLHTKRELE ALYMEEYKNK IKKPSGRPKK TRDARVYTIG
Length:1,800
Mass (Da):204,123
Last modified:July 9, 2014 - v1
Checksum:i641E719EA35DC493
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CAIX01000078 Genomic DNA Translation: CCI44743.1

Genome annotation databases

EnsemblProtistsiCCI44743; CCI44743; BN9_055670

Similar proteinsi

Entry informationi

Entry nameiA0A024GDH1_9STRA
AccessioniPrimary (citable) accession number: A0A024GDH1
Entry historyiIntegrated into UniProtKB/TrEMBL: July 9, 2014
Last sequence update: July 9, 2014
Last modified: February 28, 2018
This is version 22 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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