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Overview

StatusReference proteome
Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome_redundancy">more...</a>)</p> 32,608
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000291000
Taxonomy9925 - Capra hircus
Last modifiedJuly 15, 2019
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_001704415.1 from Ensembl

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Chromosome 6919
Chromosome 21391
Chromosome 191699
Chromosome 111364
Chromosome 24475
Chromosome 14720
Chromosome 151273
Chromosome 31812
Chromosome 81132
Chromosome 21808
Chromosome 251053
Chromosome 17783
Chromosome 20495
Chromosome 41117
Chromosome 28450
Chromosome 26593
Chromosome 29922
Chromosome 71762
Chromosome 101329
Chromosome 51820
Chromosome 9743
Chromosome 131184
Chromosome 181674
Chromosome 16968
Chromosome 22813
Chromosome 23916
Chromosome 12518
Chromosome 11330
Chromosome 27378
Unassembled WGS sequence2184

Publications

  1. "Polished mammalian reference genomes with single-molecule sequencing and chromosome conformation capture applied to the Capra hircus genome."
    Bickhart D.M., Koren S., Rosen B., Hastie A., Liachko I., Sullivan S.T., Burton J., Sayre B.L., Huson H.J., Lee J., Lam E., Kelley C.M., Hutchison J.L., Zhou Y., Sun J., Crisa A., Schwartz J.C., Hammond J.A.
    Smith T.P.
    Submitted (APR-2016) to the EMBL/GenBank/DDBJ databases
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Main funding by: National Institutes of Health

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