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Overview

StatusReference proteome
Proteinsi740
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000229774
Taxonomy1974432 - Candidatus Pacearchaeota archaeon CG_4_9_14_3_um_filter_30_11
Last modifiedOctober 26, 2018
Genome assembly and annotationi GCA_002790875.1 from ENA/EMBL
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Candidatus Pacearchaeota archaeon CG_4_9_14_3_um_filter_30_11 pan proteome (fasta)

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Unassembled WGS sequence740

Publications

  1. "Depth-based differentiation of microbial function through sediment-hosted aquifers and enrichment of novel symbionts in the deep terrestrial subsurface."
    Probst A.J., Ladd B., Jarett J.K., Geller-Mcgrath D.E., Sieber C.M.K., Emerson J.B., Anantharaman K., Thomas B.C., Malmstrom R., Stieglmeier M., Klingl A., Woyke T., Ryan C.M., Banfield J.F.
    Submitted (SEP-2017) to the EMBL/GenBank/DDBJ databases
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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