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Overview

StatusReference proteome
Proteinsi1,408
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000186650
Taxonomy1805095 - Crenarchaeota archaeon 13_1_40CM_3_52_10
Last modifiedOctober 26, 2018
Genome assembly and annotationi GCA_001918765.1 from ENA/EMBL
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Crenarchaeota archaeon 13_1_40CM_3_52_10 pan proteome (fasta)

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Unassembled WGS sequence1408

Publications

  1. "Proteogenomic analyses indicate bacterial methylotrophy and archaeal heterotrophy are prevalent below the grass root zone."
    Butterfield C.N., Li Z., Andeer P.F., Spaulding S., Thomas B.C., Singh A., Hettich R.L., Suttle K.B., Probst A.J., Tringe S.G., Northen T., Pan C., Banfield J.F.
    Peerj 2016:E2687-E2687(2016) [PubMed] [Europe PMC] [Abstract]
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