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Overview

StatusReference proteome
Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome%5Fredundancy">more...</a>)</p> 92
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a>. It consists of the characters 'UP' followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000153037
Taxonomy10377 - Epstein-Barr virus (strain B95-8)
StrainB95-8
Last modifiedFebruary 26, 2021
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_002402265.1 from ENA/EMBL full
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Epstein-Barr virus (strain B95-8) (HHV-4) (Human herpesvirus 4) pan proteome (fasta)
Completenessi <p>Complete Proteome Detector (CPD) is an algorithm which employs statistical evaluation of the completeness and quality of proteomes in UniProt, by looking at the sizes of taxonomically close proteomes. Possible values are 'Standard', 'Close to Standard' and 'Outlier'.</p> Close to standard (high value)

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Component representationProteins
Genome92

Publications

  1. "Latent and lytic cycle promoters of Epstein-Barr virus."
    Farrell P.J., Bankier A., Seguin C., Deininger P., Barrell B.G.
    EMBO J. 2:1331-1338(1983) [PubMed] [Europe PMC] [Abstract]
  2. "Transcription and DNA sequence of the BamHI L fragment of B95-8 Epstein-Barr virus."
    Biggin M., Farrell P.J., Barrell B.G.
    EMBO J. 3:1083-1090(1984) [PubMed] [Europe PMC] [Abstract]
  3. "The EB virus genome in Daudi Burkitt's lymphoma cells has a deletion similar to that observed in a non-transforming strain (P3HR-1) of the virus."
    Jones M.D., Foster L., Sheedy T., Griffin B.E.
    EMBO J. 3:813-821(1984) [PubMed] [Europe PMC] [Abstract]
  4. "A spliced Epstein-Barr virus gene expressed in immortalized lymphocytes is created by circularization of the linear viral genome."
    Laux G., Perricaudet M., Farrell P.J.
    EMBO J. 7:769-774(1988) [PubMed] [Europe PMC] [Abstract]
  5. "Sequence analysis and in vitro transcription of portions of the Epstein-Barr virus genome."
    Deininger P.L., Bankier A., Farrell P., Baer R., Barrell B.
    J. Cell. Biochem. 19:267-274(1982) [PubMed] [Europe PMC] [Abstract]
  6. "Organization of the Epstein-Barr virus DNA molecule. III. Location of the P3HR-1 deletion junction and characterization of the NotI repeat units that form part of the template for an abundant 12-O-tetradecanoylphorbol-13-acetate-induced mRNA transcript."
    Jeang K.T., Hayward S.D.
    J. Virol. 48:135-148(1983) [PubMed] [Europe PMC] [Abstract]
  7. "Sequence analysis of the 17,166 base-pair EcoRI fragment C of B95-8 Epstein-Barr virus."
    Bankier A.T., Deininger P.L., Farrell P.J., Barrell B.G.
    Mol. Biol. Med. 1:21-45(1983) [PubMed] [Europe PMC] [Abstract]
  8. "DNA sequence and transcription of the BamHI fragment B region of B95-8 Epstein-Barr virus."
    Seguin C., Farrell P.J., Barrell B.G.
    Mol. Biol. Med. 1:369-392(1983) [PubMed] [Europe PMC] [Abstract]
  9. "DNA sequence analysis of the EcoRI Dhet fragment of B95-8 Epstein-Barr virus containing the terminal repeat sequences."
    Bankier A.T., Deininger P.L., Satchwell S.C., Baer R., Farrell P.J., Barrell B.G.
    Mol. Biol. Med. 1:425-445(1983) [PubMed] [Europe PMC] [Abstract]
  10. "Homology between two EBV early genes and HSV ribonucleotide reductase and 38K genes."
    Gibson T., Stockwell P., Ginsburg M., Barrell B.
    Nucl. Acids Res. 12:5087-5099(1984) [PubMed] [Europe PMC] [Abstract]
  11. "Clustered alternative splice sites in Epstein-Barr virus RNAs."
    Bodescot M., Perricaudet M.
    Nucl. Acids Res. 15:5887-5887(1987) [PubMed] [Europe PMC] [Abstract]
  12. "Molecular cloning of the complete Epstein-Barr virus genome as a set of overlapping restriction endonuclease fragments."
    Arrand J.R., Rymo L., Walsh J.E., Bjorck E., Lindahl T., Griffin B.E.
    Nucl. Acids Res. 9:2999-3014(1981) [PubMed] [Europe PMC] [Abstract]
  13. "Possible role of flanking nucleotides in recognition of the AUG initiator codon by eukaryotic ribosomes."
    Kozak M.
    Nucl. Acids Res. 9:5233-5252(1981) [PubMed] [Europe PMC] [Abstract]
  14. "Homologous upstream sequences near Epstein-Barr virus promoters."
    Farrell P.J., Deininger P.L., Bankier A., Barrell B.
    Proc. Natl. Acad. Sci. USA 80:1565-1569(1983) [PubMed] [Europe PMC] [Abstract]
  15. "A cis-acting element from the Epstein-Barr viral genome that permits stable replication of recombinant plasmids in latently infected cells."
    Yates J., Warren N., Reisman D., Sugden B.
    Proc. Natl. Acad. Sci. USA 81:3806-3810(1984) [PubMed] [Europe PMC] [Abstract]
  16. "Sequence and transcription of Raji Epstein-Barr virus DNA spanning the B95-8 deletion region."
    Parker B.D., Bankier A., Satchwell S., Barrell B., Farrell P.J.
    Virology 179:339-346(1990) [PubMed] [Europe PMC] [Abstract]
  17. "Updated Epstein?Barr virus (EBV) DNA sequence and analysis of a promoter for the BART (CST, BARF0) RNAs of EBV."
    de Jesus O., Smith P.R., Spender L.C., Elgueta Karstegl C., Niller H.H., Huang D., Farrell P.J.
    Virology 84:1443-1450(2003) [PubMed] [Europe PMC] [Abstract]
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