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Overview

StatusReference proteome
Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome_redundancy">more...</a>)</p> 11,914
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000092553
Taxonomy30019 - Drosophila busckii
Last modifiedNovember 5, 2019
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_001277935.1 from ENA/EMBL full
BuscoC:91.5%[S:88.2%,D:3.3%],F:2.7%,M:5.8%,n:2799
CompletenessStandard

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Component representationProteins
Chromosome x sequence1883
Chromosome 3r sequence2806
Chromosome 4 sequence82
Chromosome 3l sequence2344
Chromosome 2r sequence2393
Chromosome 2l sequence2406

Publications

  1. "Ancestral chromatin configuration constrains chromatin evolution on differentiating sex chromosomes in Drosophila."
    Zhou Q., Bachtrog D.
    Submitted (AUG-2015) to the EMBL/GenBank/DDBJ databases
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Main funding by: National Institutes of Health

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