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Overview

StatusReference proteome
Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome%5Fredundancy">more...</a>)</p> 14,302
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a>. It consists of the characters 'UP' followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000075809
Taxonomy64791 - Trachymyrmex zeteki
Last modifiedDecember 1, 2019
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_001594055.1 from ENA/EMBL full
BuscoC:90.5%[S:90.2%,D:0.2%],F:3.9%,M:5.6%,n:4415
CompletenessStandard

Trachymyrmex zeteki are fungus-growing attine ants that cultivate basidiomycete fungi for food. These fungus farming ants live in a mutualistic symbiotic relationship with the fungus. Species belonging to genus Trachymyrmex degrade a diverse spectrum of freshly shed flowers, thin fallen leaf fragments, minor twigs, caterpillar faeces and seeds and provide it to the fungus in exchange of food. These fungus growing ants are the only non-human organism along with termites that have evolved to participate in farming comparable to that in humans.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Component representationProteins
Unassembled WGS sequence14302

Publications

  1. "Trachymyrmex zeteki WGS genome."
    Nygaard S., Hu H., Boomsma J., Zhang G.
    Submitted (SEP-2015) to the EMBL/GenBank/DDBJ databases
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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