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Overview

Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome_redundancy">more...</a>)</p> 3,865
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000061465
Taxonomy1774743 - Bacillus sp. SDLI1
StrainSDLI1
Last modifiedNovember 5, 2019
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_001553895.1 from ENA/EMBL full
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Bacillus subtilis (strain 168) pan proteome (fasta)
BuscoC:99.2%[S:99.2%,D:0%],F:0.6%,M:0.2%,n:526
CompletenessStandard

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Component representationProteins
Chromosome3865

Publications

  1. "Whole-Genome Sequence of Bacillus sp. SDLI1, Isolated from the Social Bee Scaptotrigona depilis."
    Paludo C.R., Ruzzini A.C., Silva-Junior E.A., Pishchany G., Currie C.R., Nascimento F.S., Kolter R.G., Clardy J., Pupo M.T.
    Genome Announc 4:0-0(2016) [PubMed] [Europe PMC] [Abstract]
  2. "Whole-genome sequence of Bacillus sp. SDLI1 isolated from the social bee Scaptotrigona depilis."
    Paludo C., Ruzzini A., Silva-Junior E., Pishchany G., Currie C., Nascimento F., Kolter R., Pupo M., Clardy J.
    Submitted (JAN-2016) to the EMBL/GenBank/DDBJ databases
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