Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Overview

Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome%5Fredundancy">more...</a>)</p> 4,718
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a>. It consists of the characters 'UP' followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000031758
Taxonomy745156 - Escherichia coli 1303
Strain1303
Last modifiedDecember 1, 2019
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_000829985.1 from ENA/EMBL full
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Escherichia coli (strain K12) pan proteome (fasta)
BuscoC:100%[S:99.9%,D:0.1%],F:0%,M:0%,n:781
CompletenessStandard

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Component representationProteins
Chromosome4479
Plasmid p1303_55
Plasmid p1303_109113
Plasmid p1303_95121

Publications

  1. "Complete genome sequences of Escherichia coli strains 1303 and ECC-1470 isolated from bovine mastitis."
    Leimbach A., Poehlein A., Daniel R., Dobrindt U.
    Submitted (DEC-2014) to the EMBL/GenBank/DDBJ databases
  2. "Whole-Genome Sequences of 80 Environmental and Clinical Isolates of Burkholderia pseudomallei."
    Johnson S.L., Baker A.L., Chain P.S., Currie B.J., Daligault H.E., Davenport K.W., Davis C.B., Inglis T.J., Kaestli M., Koren S., Mayo M., Merritt A.J., Price E.P., Sarovich D.S., Warner J., Rosovitz M.J.
    Genome Announc. 3:0-0(2015) [PubMed] [Europe PMC] [Abstract]
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again