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Overview

StatusReference proteome
Proteinsi1,444
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000030944
Taxonomy1410606 - Candidatus Nitrosopelagicus brevis
StrainV2
Last modifiedNovember 9, 2018
Genome assembly and annotationi GCA_000812185.1 from ENA/EMBL
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Candidatus Nitrosopelagicus brevis pan proteome (fasta)

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Chromosome1444

Publications

  1. "Genomic and proteomic characterization of "Candidatus Nitrosopelagicus brevis": An ammonia-oxidizing archaeon from the open ocean."
    Santoro A.E., Dupont C.L., Richter R.A., Craig M.T., Carini P., McIlvin M.R., Yang Y., Orsi W., Moran D., Saito M.
    Proc. Natl. Acad. Sci. U.S.A. 2015:1173-1178(2015) [PubMed] [Europe PMC] [Abstract]
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