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Overview

Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome%5Fredundancy">more...</a>)</p> 5,971
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a>. It consists of the characters 'UP' followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000019105
Taxonomy1350465 - Pseudomonas aeruginosa VRFPA03
StrainVRFPA03
Last modifiedDecember 1, 2019
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_000467675.1 from ENA/EMBL full
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) pan proteome (fasta)
BuscoC:82.7%[S:81.9%,D:0.9%],F:2.7%,M:14.6%,n:452
CompletenessStandard

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Component representationProteins
Unassembled WGS sequence5971

Publications

  1. "Draft Genome sequence of Carbapenemase gene DIM-1 producing multidrug-resistant Pseudomonas aeruginosa strain VRFPA03, isolated from human corneal button in India."
    Murugan N., Malathi J., Umashankar V., Madhavan H.N.
    Submitted (JUN-2013) to the EMBL/GenBank/DDBJ databases
  2. "First complete genome sequence of ocular isolate carrying Blavim-2 mediated Multi-Drug-Resistant(MDR) Pseudomonas Aeruginosa VRFPA04 from India and two draft genome sequence of ocular isolates Pseudomonas Aeruginosa VRFPA03 and VRFPA05 harboring novel bladim-1 and blages-9 respectively."
    Murugan N., Malathi J., Umashankar V., Madhavan H.N.
    Int J Pharm Pharm Sci 7:291-292(2015)
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