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Overview

StatusReference proteome
Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome%5Fredundancy">more...</a>)</p> 27,053
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a>. It consists of the characters 'UP' followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000016666
Taxonomy8840 - Anas platyrhynchos platyrhynchos
Last modifiedMarch 21, 2020
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_002743455.1 from Ensembl full
BuscoC:0%[S:0%,D:0%],F:0%,M:100%,n:8338
CompletenessOutlier

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Component representationProteins
Unassembled WGS sequence3988
Chromosome 13485
Chromosome 22399
Chromosome 31977
Chromosome 41318
Chromosome 51502
Chromosome 6796
Chromosome 7802
Chromosome 8788
Chromosome 9708
Chromosome 10549
Chromosome 11621
Chromosome 12515
Chromosome 13520
Chromosome 14525
Chromosome 15633
Chromosome 16513
Chromosome 18400
Chromosome 19404
Chromosome 20440
Chromosome 21504
Chromosome 22339
Chromosome 23184
Chromosome 24335
Chromosome 25291
Chromosome 26205
Chromosome 27357
Chromosome 28288
Chromosome 29271
Chromosome Z1396

Publications

  1. "A new Pekin duck reference genome."
    Hou Z.-C., Zhou Z.-K., Zhu F., Hou S.-S.
    Submitted (OCT-2017) to the EMBL/GenBank/DDBJ databases
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Main funding by: National Institutes of Health

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