Proteomes - Mycolicibacterium vanbaalenii (strain DSM 7251 / JCM 13017 / NRRL B-24157 / PYR-1) (Mycobacterium vanbaalenii)
Overview
Status | Reference proteome |
Proteinsi | 5,902 |
Proteome IDi | UP000009159 |
Taxonomy | 350058 - Mycolicibacterium vanbaalenii (strain DSM 7251 / JCM 13017 / NRRL B-24157 / PYR-1) |
Strain | DSM 7251 / JCM 13017 / NRRL B-24157 / PYR-1 |
Last modified | August 19, 2020 |
Genome assembly and annotationi | GCA_000015305.1 from ENA/EMBL full |
Pan proteomei | This proteome is part of the Mycolicibacterium vanbaalenii (strain DSM 7251 / JCM 13017 / NRRL B-24157 / PYR-1) (Mycobacterium vanbaalenii) pan proteome (fasta) |
Buscoi | C:99.6%[S:98.9%,D:0.7%],F:0%,M:0.4%,n:743 corynebacteriales_odb10 |
Completenessi | Standard |
Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) was originally isolated from oil-contaminated sediment based on its ability to degrade pyrene, a polycyclic aromatic hydrocarbon (PAH). It can also degrade or transform biphenyl, naphthalene, anthracene, fluoranthene, 1-nitropyrene, phenanthrene, benzo[a]pyrene, benz[a]anthracene, and 7,12-dimethylbenz[a]anthracene. It is considered as a potential candidate for bioremediation of PAH-contaminated areas.
Mycobacteria have an unusual outer membrane approximately 8nm thick, despite being considered Gram-positive. The outer membrane and the mycolic acid-arabinoglactan-peptidoglycan polymer form the cell wall, which constitutes an efficient permeability barrier in conjunction with the cell inner membrane.
Publications
- "Complete sequence of Mycobacterium vanbaalenii PYR-1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Singan V., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Anderson I.J., Miller C., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases