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Overview

StatusReference proteome
Proteinsi7,976
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000008866
Taxonomy663331 - Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371)
StrainATCC MYA-4681 / CBS 112371
Last modifiedMay 10, 2018
Genome assembly and annotationi GCA_000151125.2 from ENA/EMBL
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) (Trichophyton mentagrophytes) pan proteome (fasta)

Arthroderma benhamiae (the teleomorph of Trichophyton mentagrophytes) is a fungal dermatophtye (Arthrodermataceae) which causes highly inflammatory cutaneous infections such as tinea corporis (ringworm) in animals and humans. This species is usually contracted through contact with rodents especially guinea pigs. It is an emerging model organism for dermatophytes because it is comparatively fast growing, it can complete many aspects of its life cycle in the lab, and a guinea pig infection model and a system for targeted gene deletion in the fungus has been established.

The assembled genome of A. benhamiae is 22.3 Mb and has 7,980 predicted protein coding sequences. Genomic analysis revealed several secreted proteases whose role in pathogenicity was confirmed experimentally during keratin degradation by the dermatophtye.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Unassembled WGS sequence7976
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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