Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Overview

Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome%5Fredundancy">more...</a>)</p> 1,161
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a>. It consists of the characters 'UP' followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000008814
Taxonomy570417 - Wolbachia pipientis subsp. Culex pipiens (strain wPip)
StrainwPip
Last modifiedMarch 7, 2021
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_000073005.1 from ENA/EMBL full
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Wolbachia endosymbiont of Onchocerca ochengi pan proteome (fasta)
Buscoi <p>The Benchmarking Universal Single-Copy Ortholog (BUSCO) assessment tool is used, for eukaryotic and bacterial proteomes, to provide quantitative measures of UniProt proteome data completeness in terms of expected gene content. BUSCO scores include percentages of complete (C) single-copy (S) genes, complete (C) duplicated (D) genes, fragmented (F) and missing (F) genes, as well as the total number of orthologous clusters (n) used in the BUSCO assessment.</p> C:99.5%[S:98.9%,D:0.5%],F:0%,M:0.5%,n:364 rickettsiales_odb10
Completenessi <p>Complete Proteome Detector (CPD) is an algorithm which employs statistical evaluation of the completeness and quality of proteomes in UniProt, by looking at the sizes of taxonomically close proteomes. Possible values are 'Standard', 'Close to Standard' and 'Outlier'.</p> Close to standard (high value)

Wolbachia pipientis, a very widespread invertebrate endosymbiont, has been divided into a number of supergroups: A and B in arthropods, C and D in filarial nematodes, plus at least 3 other, less common supergroups primarily found in arthropods. In insects, where more than 20% of all species have been estimated to carry Wolbachia, and in other arthropods Wolbachia manipulates host reproduction in a remarkable variety of ways, including feminization, parthenogenesis, male killing and cytoplasmic incompatibility (CI). All are selected due to the uniparental inheritance of Wolbachia as it is solely transmitted through the eggs and not from males. CI, patterns of sterility classically seen when infected males mate with uninfected females, can allow Wolbachia to spread rapidly to very high frequencies in populations, since females that do carry the bacterium can mate successfully with both infected and uninfected males.

Wolbachia pipientis was first discovered and described in Culex pipiens mosquitoes; it is the only strain reported from this group of sibling species of mosquito and is found at close to 100% frequency in all populations examined, except for one in South Africa. The Cx. pipiens group includes Cx. quinquefasciatus, the primary vector of lymphatic filariasis. To date complete genome sequences have been published of the wMel strain, a supergroup A Wolbachia found in Drosophila melanogaster (WOLPM), and the supergroup D wBm strain, a mutualist of the nematode Brugia malayi (WOLTR) (modified from PubMed 18550617).

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Component representationProteins
Chromosome1161
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again