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Overview

StatusReference proteome
Proteinsi44,786
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000008810
Taxonomy15368 - Brachypodium distachyon
StrainBd21
Last modifiedNovember 9, 2018
Genome assembly and annotationi GCA_000005505.4 from EnsemblPlants

Brachypodium distachyon (purple false brome) is an annual grass from the family Poaceae (formerly known as the Gramineae) and is endemic to the Mediterranean and Middle East.

Scientific interest in Brachypodium distachyon arises from its membership of the same subfamily of the Poaceae as the cereal crops wheat, rye and barley, and the forage and turf grasses (subfamily Pooidae). Economically important members of this subfamily, notably wheat, have large and complex genomes, so Brachypodium distachyon serves as a valuable model organism for this taxonomic group.

Brachypodon distachyon has a haploid chromosome number of 5, containing 270 Mb with 30,000 protein-coding genes. The diploid inbred line Bd21 was sequenced.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Chromosome 112902
Chromosome 210088
Chromosome 39906
Chromosome 47539
Chromosome 54354
Unplaced
11

Publications

  1. "Genome sequencing and analysis of the model grass Brachypodium distachyon."
    Nature 2010:763-768(2010) [PubMed] [Europe PMC] [Abstract]
  2. "The complete chloroplast genome sequence of Brachypodium distachyon: sequence comparison and phylogenetic analysis of eight grass plastomes."
    Bortiri E., Coleman-Derr D., Lazo G.R., Anderson O.D., Gu Y.Q.
    BMC Res. Notes 2008:61-61(2008) [PubMed] [Europe PMC] [Abstract]
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