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Overview

StatusReference proteome
Proteinsi2,812
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000008674
StrainDSM 13855 / M31
Last modifiedNovember 9, 2018
Genome assembly and annotationi GCA_000013045.1 from ENA/EMBL
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Salinibacter ruber (strain DSM 13855 / M31) pan proteome (fasta)

Salinibacter ruber DSM 13855 is Gram-negative, extremely halophilic, aerobic, heterotrophic, motile and red-pigmented (high proportion of carotenoids in its membrane) bacterium belonging to the Cytophaga-Flexibacter-Bacteroides group. This bacterium coexists in significant colonies with halophilic archaea under saline conditions. In contrast to other bacteria they do not regulate their intracellular salt conditions through proton pumps, but instead their protein makeup has adapted to be functional under high ionic conditions.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Chromosome2780
Plasmid pSR3532
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Main funding by: National Institutes of Health

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