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Overview

StatusReference proteome
Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome%5Fredundancy">more...</a>)</p> 1,380
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a>. It consists of the characters 'UP' followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000008558
Taxonomy441768 - Acholeplasma laidlawii (strain PG-8A)
StrainPG-8A
Last modifiedJanuary 9, 2020
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_000018785.1 from ENA/EMBL full
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Acholeplasma laidlawii (strain PG-8A) pan proteome (fasta)
BuscoC:74.7%[S:74.1%,D:0.6%],F:1.8%,M:23.5%,n:166
CompletenessStandard

Acholeplasma laidlawii is found in soil, compost, wastewaters, cell cultures as well as in human tissues and in many animal species (birds, bovine, goat, equine, ovine, porcine, feline, rodent, primates). Acholeplasma species are capable of de novo biosynthesis of carotenoids localized exclusively in the cell membrane. Acholeplasma laidlawii is capable of synthesizing glucose using a pyrophosphate-dependent 6-phosphofructokinase which has also been detected in other acholeplasmas. Acholeplasma laidlawii and phytoplasmas are the only mollicutes known to use the universal genetic code, in which UGA is a stop codon.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Component representationProteins
Chromosome1380
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Main funding by: National Institutes of Health

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