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StatusReference proteome
Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome%5Fredundancy">more...</a>)</p> 11,211
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="">proteome</a>. It consists of the characters 'UP' followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000008493
Taxonomy597362 - Agaricus bisporus var. burnettii (strain JB137-S8 / ATCC MYA-4627 / FGSC 10392)
StrainJB137-S8 / ATCC MYA-4627 / FGSC 10392
Last modifiedFebruary 19, 2020
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="">more...</a>)</p> GCA_000300555.1 from ENA/EMBL full
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Agaricus bisporus var. burnettii (strain JB137-S8 / ATCC MYA-4627 / FGSC 10392) (White button mushroom) pan proteome (fasta)

The white button mushroom Agaricus bisporus (Agaricaceae) is a terricolous secondary decomposer of leaf and needle litter. It is the preferred fungal model for adaptation, persistence, and growth in humic-rich environment where it takes advantage of the nutrients not readily available to primary decomposers. The variety A. bisporus var. burnettii was delineated from the species based upon morphological and genetic studies of specimens found in the Sonoran Desert of California.

The genome of var. burnettii is estimated to be 32.6 Mb with 11,289 protein-coding genes. Analysis and comparison with A. bisporus var. bisporus suggest that the species genome encodes a full repertoire of polysaccharide-degrading enzymes similar to that of wood-decayers, but their expression varies under different growth conditions revealing its ability to adapt to its environment.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Component representationProteins
Unassembled WGS sequence11211
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Main funding by: National Institutes of Health

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