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Overview

StatusReference proteome
Proteinsi6,403
Gene counti - Download one protein sequence per gene (FASTA)
Proteome IDiUP000008330
Taxonomy395492 - Rhizobium leguminosarum bv. trifolii (strain WSM2304)
StrainWSM2304
Last modifiedJune 23, 2018
Genome assembly and annotationi GCA_000021345.1 from ENA/EMBL
Pan proteomei This proteome is part of the Rhizobium leguminosarum bv. trifolii (strain WSM2304) pan proteome (fasta)

Rhizobium leguminosarum is a widely studied alpha-proteobacterial N2-fixing legume symbiont of legumes. It has three biovars - viciae, trifolii, phaseoli - that differ in their host specificity. The host-specificity genes are carried on large plasmids that also carry the genes for nitrogen fixation. All strains of R. leguminosarum have several large plasmids, but the number and sizes of plasmids varies among strains. This large number of plasmids distinguishes R. leguminosarum from the other rhizobia for which complete genome sequences have been determined.

WSM2304 is able to nodulate American and African perennial clovers, while the dissimilar strain WSM1325 nodulates many perennial clovers of Mediterranean origin used in farming and is one of the most important clover inoculants. It is important to understand this incompatibility.

Componentsi

Component nameGenome Accession(s)
Proteins
Chromosome4320
Plasmid pRLG2011155
Plasmid pRLG202450
Plasmid pRLG204223
Plasmid pRLG203255

Publications

  1. "Complete sequence of plasmid 1 of Rhizobium leguminosarum bv. trifolii WSM2304."
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Yates R.
    Reeve W.
    Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases
  2. "Complete sequence of chromosome of Rhizobium leguminosarum bv. trifolii WSM2304."
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Yates R.
    Reeve W.
    Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases
  3. "Complete sequence of plasmid 4 of Rhizobium leguminosarum bv. trifolii WSM2304."
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Yates R.
    Reeve W.
    Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases
  4. "Complete sequence of plasmid 3 of Rhizobium leguminosarum bv. trifolii WSM2304."
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Yates R.
    Reeve W.
    Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases
  5. "Complete sequence of plasmid 2 of Rhizobium leguminosarum bv. trifolii WSM2304."
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Yates R.
    Reeve W.
    Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases
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