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Overview

StatusReference proteome
Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome%5Fredundancy">more...</a>)</p> 167
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a>. It consists of the characters 'UP' followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000008288
Taxonomy79700 - Rat cytomegalovirus (strain Maastricht)
StrainMaastricht
Last modifiedDecember 21, 2020
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_000844625.1 from ENA/EMBL full
Completenessi <p>Complete Proteome Detector (CPD) is an algorithm which employs statistical evaluation of the completeness and quality of proteomes in UniProt, by looking at the sizes of taxonomically close proteomes. Possible values are 'Standard', 'Close to Standard' and 'Outlier'.</p> Standard

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Component representationProteins
Genome167

Publications

  1. "Cloning and sequence analysis of the genes encoding DNA polymerase, glycoprotein B, ICP18.5 and major DNA-binding protein of rat cytomegalovirus."
    Beuken E., Slobbe R., Bruggeman C.A., Vink C.
    J. Gen. Virol. 77:1559-1562(1996) [PubMed] [Europe PMC] [Abstract]
  2. "Cloning and functional characterization of the origin of lytic-phase DNA replication of rat cytomegalovirus."
    Vink C., Beuken E., Bruggeman C.A.
    J. Gen. Virol. 78:2963-2973(1997) [PubMed] [Europe PMC] [Abstract]
  3. "The rat cytomegalovirus R32 gene encodes a virion-associated protein that elicits a strong humoral immune response in infected rats."
    Beuken E., Grauls G., Bruggeman C.A., Vink C.
    J. Gen. Virol. 80:2719-2728(1999) [PubMed] [Europe PMC] [Abstract]
  4. "Structure of the rat cytomegalovirus genome termini."
    Vink C., Beuken E., Bruggeman C.A.
    J. Virol. 70:5221-5229(1996) [PubMed] [Europe PMC] [Abstract]
  5. "The R33 G protein-coupled receptor gene of rat cytomegalovirus plays an essential role in the pathogenesis of viral infection."
    Beisser P.S., Vink C., Van Dam J.G., Grauls G., Vanherle S.J., Bruggeman C.A.
    J. Virol. 72:2352-2363(1998) [PubMed] [Europe PMC] [Abstract]
  6. "Deletion of the R78 G protein-coupled receptor gene from rat cytomegalovirus results in an attenuated, syncytium-inducing mutant strain."
    Beisser P.S., Grauls G., Bruggeman C.A., Vink C.
    J. Virol. 73:7218-7230(1999) [PubMed] [Europe PMC] [Abstract]
  7. "The r144 major histocompatibility complex class I-like gene of rat cytomegalovirus is dispensable for both acute and long-term infection in the immunocompromised host."
    Beisser P.S., Kloover J.S., Grauls G.E., Blok M.J., Bruggeman C.A., Vink C.
    J. Virol. 74:1045-1050(2000) [PubMed] [Europe PMC] [Abstract]
  8. "Complete DNA sequence of the rat cytomegalovirus genome."
    Vink C., Beuken E., Bruggeman C.A.
    J. Virol. 74:7656-7665(2000) [PubMed] [Europe PMC] [Abstract]
  9. "The Maastricht strain and England strain of rat cytomegalovirus represent different betaherpesvirus species rather than strains."
    Beisser P.S., Kaptein S.J., Beuken E., Bruggeman C.A., Vink C.
    Virology 246:341-351(1998) [PubMed] [Europe PMC] [Abstract]
  10. "Rat cytomegalovirus R89 is a highly conserved gene which expresses a spliced transcript."
    Gruijthuijsen Y.K., Beuken E., Bruggeman C.A., Vink C.
    Virus Res. 69:119-130(2000) [PubMed] [Europe PMC] [Abstract]
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