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Overview

StatusReference proteome
Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome_redundancy">more...</a>)</p> 5,019
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000008148
Taxonomy290338 - Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
StrainATCC BAA-895 / CDC 4225-83 / SGSC4696
Last modifiedSeptember 30, 2019
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_000018045.1 from ENA/EMBL
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Citrobacter amalonaticus pan proteome (fasta)

The genus Citrobacter was originally distinguished from other members of the Enterobacteriaceae by its ability to use citrate as a carbon source. Citrobacter infection is commonly reported in neonates and immunocompromised patients. Citrobacter koseri, formerly known as Citrobacter diversus, is best known as the cause of sepsis and meningitis leading to central nervous system (CNS) abscesses in neonates and young infants. The majority of cases are sporadic, with no clear source of infection. A significant number of the infants with abscesses die, and many sustain CNS damage. It adults, however, Citrobacter infection with central nervous system involvement is rare, and is usually associated with an underlying disorder. Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) was isolated in 1983 in Maryland where it caused neonatal meningitis.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Chromosome4991
Plasmid pCKO213
Plasmid pCKO315
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Main funding by: National Institutes of Health

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