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StatusReference proteome
Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome_redundancy">more...</a>)</p> 17,309
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000008144
Taxonomy7719 - Ciona intestinalis
Last modifiedNovember 5, 2019
Genome assemblyi <p>Identifier for the genome assembly (<a href="">more...</a>)</p> GCA_000224145.1 from Ensembl full
Genome annotationi Ensembl

Ciona intestinalis (the vase tunicate or sea squirt) is a solitary, sessile member of the Urochordata. Found globally in tidal marine habitats, it is considered to be an invasive species as it forms dense aggregates on structures such as boat hulls and aquaculture rafts. In the laboratory, it is widely used as a model invertebrate chordate by researchers interested in chordate development and evolution.

The Ciona intestinalis genome is unusually small, about one-twentieth the size of the human genome. It contains approximately 14,000 protein-coding genes. Most of the sequence originates from a single individual from Half Moon Bay, California.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Component representationProteins
Unassembled WGS sequence17296
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Main funding by: National Institutes of Health

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