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Overview

StatusReference proteome
Proteinsi1,684
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000008129
Taxonomy866775 - Aerococcus urinae (strain ACS-120-V-Col10a)
StrainACS-120-V-Col10a
Last modifiedOctober 24, 2018
Genome assembly and annotationi GCA_000193205.1 from ENA/EMBL
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Aerococcus urinae (strain ACS-120-V-Col10a) pan proteome (fasta)

Aerococcus urinae, a commensal of the urinary tract, has recently been recognized as as emerging urinary tract pathogen causing infection primarily in elderly patients with local or systemic predisposing conditions such as prostate hyperplasia, urethral stricture, diabetes mellitus, malignancy or dementia. It is probably currently under-diagnosed. Strain ACS-120-V-Col10a, also known as CCUG 59500, was isolated from a human vagina in Belgium in 2007. It is being sequenced as part of the Human Microbiome Project (HMP).

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Chromosome1684

Publications

  1. "Complete genome sequence of Aerococcus urinae strain ACS-120-V-Col10a."
    Durkin A.S., Madupu R., Radune D., Hostetler J., Torralba M., Gillis M., Methe B., Sutton G., Nelson K.E.
    Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
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Main funding by: National Institutes of Health

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