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Overview

StatusReference proteome
Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome%5Fredundancy">more...</a>)</p> 1,684
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a>. It consists of the characters 'UP' followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000008129
Taxonomy866775 - Aerococcus urinae (strain ACS-120-V-Col10a)
StrainACS-120-V-Col10a
Last modifiedMarch 21, 2020
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_000193205.1 from ENA/EMBL full
BuscoC:90.3%[S:90.3%,D:0%],F:0.7%,M:9%,n:402
CompletenessStandard

Aerococcus urinae, a commensal of the urinary tract, has recently been recognized as as emerging urinary tract pathogen causing infection primarily in elderly patients with local or systemic predisposing conditions such as prostate hyperplasia, urethral stricture, diabetes mellitus, malignancy or dementia. It is probably currently under-diagnosed. Strain ACS-120-V-Col10a, also known as CCUG 59500, was isolated from a human vagina in Belgium in 2007. It is being sequenced as part of the Human Microbiome Project (HMP).

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Component representationProteins
Chromosome1684

Publications

  1. "Complete genome sequence of Aerococcus urinae strain ACS-120-V-Col10a."
    Durkin A.S., Madupu R., Radune D., Hostetler J., Torralba M., Gillis M., Methe B., Sutton G., Nelson K.E.
    Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
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Main funding by: National Institutes of Health

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