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Overview

StatusReference proteome
Proteinsi13,962
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000007755
Taxonomy103372 - Acromyrmex echinatior
Straincolony Ae372
Last modifiedApril 7, 2018
Genome assembly and annotationi GCA_000204515.1 from ENA/EMBL

Acromyrmex echinatior (syn. Acromyrmex octospinosus echinatior) from the tribe Attini is a eusocial insect which cuts and processes vegetation. It subsists on a specific species of fungus (genus Leucocoprinus) which it cultivates and feeds to the Queen and other colony members in the nest. This species is an excellent example of social evolution and also reproductive conflict studies as their queen mates with multiple males ensuring high genetic diversity among the nests' workers.

In 2011 the genome of a single male ant was sequenced to more than 100x depth coverage, creating a high-quality assembly of 300 Mb which is estimated to be 96% of the complete genome. 17,278 protein-coding genes were also identified. Comparisons with the sequenced genomes of ants from different subfamilies and identified a number of characteristics of the genome that may be associated with its evolution.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Unassembled WGS sequence13962

Publications

  1. "The genome of the leaf-cutting ant Acromyrmex echinatior suggests key adaptations to advanced social life and fungus farming."
    Nygaard S., Zhang G., Schiott M., Li C., Wurm Y., Hu H., Zhou J., Ji L., Qiu F., Rasmussen M., Pan H., Hauser F., Krogh A., Grimmelikhuijzen C.J., Wang J., Boomsma J.J.
    Genome Res. 2011:0-0(2011) [PubMed] [Europe PMC] [Abstract]
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