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Overview

StatusReference proteome
Proteinsi18,141
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000007754
Last modifiedNovember 9, 2018
Genome assemblyifrom Ensembl
Genome annotationi Ensembl

Taeniopygia guttata, the zebra finch, belongs to the order Passeriformes. It is a model organism in the field of neuroscience, especially for the study of human speech.

The genome was published in 2010. The sequence is that of a male, chosen in order to maximize coverage of the Z chromosome. It comprises 1.2 Gb. Gene models were built by ENSEMBL using alignments with chicken and other avian as well as mammalian proteins.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Chromosome 11123
Chromosome 1A889
Chromosome 1B34
Chromosome 21343
Chromosome 31169
Chromosome 4741
Chromosome 4A349
Chromosome 5935
Chromosome 6562
Chromosome 7520
Chromosome 8416
Chromosome 9457
Chromosome 10394
Chromosome 11371
Chromosome 12348
Chromosome 13321
Chromosome 14390
Chromosome 15350
Chromosome 17300
Chromosome 18309
Chromosome 19312
Chromosome 20329
Chromosome 21192
Chromosome 2298
Chromosome 23205
Chromosome 24181
Chromosome 2592
Chromosome 26176
Chromosome 27238
Chromosome 28227
Chromosome LG51
Chromosome LG22
Chromosome LGE2242
Chromosome Z745
Mitochondrion13
Unplaced
3969
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Main funding by: National Institutes of Health

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