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StatusReference proteome
Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome%5Fredundancy">more...</a>)</p> 36,286
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="">proteome</a>. It consists of the characters 'UP' followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000007648
Taxonomy9305 - Sarcophilus harrisii
Last modifiedDecember 21, 2020
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="">more...</a>)</p> GCA_000189315.1 from Ensembl full
Buscoi <p>The Benchmarking Universal Single-Copy Ortholog (BUSCO) assessment tool is used, for eukaryotic and bacterial proteomes, to provide quantitative measures of UniProt proteome data completeness in terms of expected gene content. BUSCO scores include percentages of complete (C) single-copy (S) genes, complete (C) duplicated (D) genes, fragmented (F) and missing (F) genes, as well as the total number of orthologous clusters (n) used in the BUSCO assessment.</p> C:81.3%[S:64.8%,D:16.5%],F:4.8%,M:13.9%,n:9226 mammalia_odb10

The Tasmanian devil (Sarcophilus harrisii) is a member of the family Dasyuridae and is the largest carnivorous marsupial, reaching 76 cm in length and weighing up to 12 kg. It has sharp teeth and strong jaws that can deliver one of the most powerful bites of any mammal.

The species is restricted to the Australian island of Tasmania and is at risk of extinction in the wild due to an unusual transmissible facial cancer, the devil facial tumor disease (DFTD), which is spread between devils by the transfer of cancer cells on biting.

The reference proteome of Sarcophilus harrisii is derived from the genome sequence prepared by the Tasmanian Devil Genome Project by the Center for Comparative Genomics and Bioinformatics at Pennsylvania State University. The project analyzed genomes of two Tasmanian devil individuals, one healthy animal and one with DFTD. The size of the genome is about 3.3 Gb.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Component representationProteins
Unassembled WGS sequence36286
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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