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Overview

StatusReference proteome
Proteinsi18,505
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000007266
Taxonomy7070 - Tribolium castaneum
StrainGeorgia GA2
Last modifiedOctober 26, 2018
Genome assembly and annotationi GCA_000002335.3 from ENA/EMBL

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Linkage group 1664
Linkage group 21298
Linkage group 31539
Linkage group 41255
Linkage group 51452
Linkage group 6788
Linkage group 71448
Linkage group 81229
Linkage group 91157
Linkage group 10485
Mitochondrion12
Unassembled WGS sequence7180

Publications

  1. "The genome of the model beetle and pest Tribolium castaneum."
    Richards S., Gibbs R.A., Weinstock G.M., Brown S.J., Denell R., Beeman R.W., Gibbs R., Beeman R.W., Brown S.J., Bucher G., Friedrich M., Grimmelikhuijzen C.J., Klingler M., Lorenzen M., Richards S., Roth S., Schroder R., Tautz D.
    Bucher G.
    Nature 2008:949-955(2008) [PubMed] [Europe PMC] [Abstract]
  2. "Sequence and phylogenetic analysis of the complete mitochondrial genome of the flour beetle Tribolium castanaeum."
    Friedrich M., Muqim N.
    Mol. Phylogenet. Evol. 2003:502-512(2003) [PubMed] [Europe PMC] [Abstract]
  3. "BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum."
    Kim H.S., Murphy T., Xia J., Caragea D., Park Y., Beeman R.W., Lorenzen M.D., Butcher S., Manak J.R., Brown S.J.
    Nucleic Acids Res. 2010:D437-D442(2010) [PubMed] [Europe PMC] [Abstract]
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