Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Overview

Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome%5Fredundancy">more...</a>)</p> 3,722
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a>. It consists of the characters 'UP' followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000006800
Taxonomy882102 - Vibrio anguillarum (strain ATCC 68554 / 775)
StrainATCC 68554 / 775
Last modifiedMarch 21, 2020
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_000217675.1 from ENA/EMBL full
BuscoC:97.6%[S:97.6%,D:0%],F:0.9%,M:1.5%,n:1445
CompletenessStandard

Vibrio species represent a significant portion of the culturable heterotrophic bacteria of oceans, coastal waters and estuaries. Various species of this genus are devastating pathogens for finfish, shellfish and mammals.

Vibrio anguillarum strain 775 is an O1 serotype which causes vibriosis, a haemorrhagic septicemia, in nearly 50 species of fish, mollusks and crustaceans in fresh, brackish and marine water. It was isolated from Coho salmon off the U.S. Pacific coast in the 1970s. Most O1 serotypes (including strain 775) harbor an approximately 65 kb plasmid which encodes genes for synthesis and transport of the siderophore anguibactin, one of the main virulence factors. The fully sequenced V. anguillarum genome has been compared to draft genome sequences of other plasmid-less V. anguillarum strains as well as to V. ordalii, another bacteria that causes a quite different vibriosis (adapted from PMID 21576332).

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Component representationProteins
Chromosome I2772
Chromosome II907
Plasmid pJM152

Publications

  1. "Complete genome sequence of the marine fish pathogen Vibrio anguillarum harboring the pJM1 virulence plasmid and genomic comparison with other virulent strains of V. anguillarum and V. ordalii."
    Naka H., Dias G.M., Thompson C.C., Dubay C., Thompson F.L., Crosa J.H.
    Infect. Immun. 79:2889-2900(2011) [PubMed] [Europe PMC] [Abstract]
  2. "Complete sequence of virulence plasmid pJM1 from the marine fish pathogen Vibrio anguillarum strain 775."
    Di Lorenzo M., Stork M., Tolmasky M.E., Actis L.A., Farrell D., Welch T.J., Crosa L.M., Wertheimer A.M., Chen Q., Salinas P., Waldbeser L., Crosa J.H.
    J. Bacteriol. 185:5822-5830(2003) [PubMed] [Europe PMC] [Abstract]
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again