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Overview

Proteinsi7,773
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000006798
Taxonomy1042878 - Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1)
StrainATCC 43291 / DSM 13513 / N-1
Last modifiedNovember 9, 2018
Genome assembly and annotationi GCA_000219215.1 from ENA/EMBL
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Cupriavidus taiwanensis (strain DSM 17343 / BCRC 17206 / CIP 107171 / LMG 19424 / R1) (Ralstonia taiwanensis (strain LMG 19424)) pan proteome (fasta)

Cupriavidus necator (strainATCC 43291 / DSM 13513 / N-1) is a copper-resistant, Gram-negative bacterium isolated from soil in the vicinity of University Park, PA, USA. It is described as a nonobligate predator of various Gram-negative and Gram-positive soil bacteria and fungi. When confronted with Agromyces ramosus mycelia during the so-called attack-counterattack predation process, it produces several chemical signals, one of which chelates copper. C. necator is highly resistant to copper and its growth initiation is strongly stimulated by copper. It possesses a complete sets of genes required for polyhydroxyalkanoate metabolism, degradation of benzoate, 4-hydroxybenzoate, phenol, and chlorinated aromatic compounds, and the gentisate pathway. Putative genes coding for copper resistance proteins (copABCD) and a copper efflux P-type ATPase (copF) are present. (Adapted from PMID: 21742890).

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Chromosome 13612
Chromosome 22439
Plasmid pBB11359
Plasmid pBB2383

Publications

  1. "Complete genome sequence of the type strain Cupriavidus necator N-1."
    Poehlein A., Kusian B., Friedrich B., Daniel R., Bowien B.
    J. Bacteriol. 2011:5017-5017(2011) [PubMed] [Europe PMC] [Abstract]
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