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Overview

StatusReference proteome
Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome%5Fredundancy">more...</a>)</p> 12
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a>. It consists of the characters 'UP' followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000006720
Taxonomy10986 - Rice gall dwarf virus
Last modifiedFebruary 19, 2020
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_000870625.1 from ENA/EMBL full
CompletenessStandard

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Component representationProteins
Genome12

Publications

  1. "Sequence analysis of Pns11, a nonstructural protein of rice gall dwarf virus, and its expression and detection in infected rice plants and vector insects."
    Moriyasu Y., Ishikawa K., Kikuchi A., Imanishi S., Tomita S., Akutsu K., Omura T.
    Virus Genes 20:237-241(2000) [PubMed] [Europe PMC] [Abstract]
  2. "Molecular analysis of the genome segments S1, S4, S6, S7 and S12 of a Rice gall dwarf virus isolate from Thailand; completion of the genomic sequence."
    Moriyasu Y., Maruyama-Funatsuki W., Kikuchi A., Ichimi K., Zhong B., Yan J., Zhu Y., Suga H., Watanabe Y., Ichiki-Uehara T., Shimizu T., Hagiwara K., Kamiunten H., Akutsu K., Omura T.
    Arch. Virol. 152:1315-1322(2007) [PubMed] [Europe PMC] [Abstract]
  3. "Conserved primary structures in core capsid proteins and reassembly of core particles and outer capsids between rice gall dwarf and rice dwarf phytoreoviruses."
    Takahashi Y., Tomiyama M., Hibino H., Omura T.
    J. Gen. Virol. 75:269-275(1994) [PubMed] [Europe PMC] [Abstract]
  4. "Nucleotide sequence of segment S9 of the genome of rice gall dwarf virus."
    Koganezawa H., Hibino H., Motoyoshi F., Kato H., Noda H., Ishikawa K., Omura T.
    J. Gen. Virol. 71:1861-1863(1990) [PubMed] [Europe PMC] [Abstract]
  5. "Nucleotide sequences of genome segments S8, encoding a capsid protein, and S10, encoding a 36K protein, of rice gall dwarf virus."
    Noda H., Ishikawa K., Hibino H., Kato H., Omura T.
    J. Gen. Virol. 72:2837-2842(1991) [PubMed] [Europe PMC] [Abstract]
  6. "Sequence analysis and GTP-binding ability of the minor core protein P5 of Rice gall dwarf virus."
    Ichimi K., Kikuchi A., Moriyasu Y., Zhong X.B., Hagiwara K., Kamiunten H., Omura T.
    Jpn. Agric. Res. Q. 36:83-87(2002)
  7. "The minor outer capsid protein P2 of rice gall dwarf virus has a primary structure conserved with, yet is chemically dissimilar to, rice dwarf virus P2, a protein associated with virus infectivity."
    Maruyama W., Ichimi K., Fukui Y., Yan J., Zhu Y., Kamiunten H., Omura T.
    Arch. Virol. 142:1-9(1997)
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