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Overview

StatusReference proteome
Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome%5Fredundancy">more...</a>)</p> 2,004
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a>. It consists of the characters 'UP' followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000006061
Taxonomy891968 - Acetomicrobium mobile (strain ATCC BAA-54 / DSM 13181 / JCM 12221 / NGA)
StrainATCC BAA-54 / DSM 13181 / NGA
Last modifiedJanuary 15, 2020
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_000266925.1 from ENA/EMBL full
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Acetomicrobium mobile (strain ATCC BAA-54 / DSM 13181 / JCM 12221 / NGA) (Acetomicrobium mobile) pan proteome (fasta)
BuscoC:91.9%[S:91.9%,D:0%],F:1.4%,M:6.8%,n:148
CompletenessStandard

Anaerobic biological treatment is a frequently applied technology for decontamination of agroindustrial wastewaters by conversion of organic compounds to methane and carbon dioxide. The application of this treatment under thermophilic conditions has increased in recent years. However, when proteins are a major constituent of such wastes, their degradation is often incomplete. Isolation and physiological characterization of novel strains help to explain their role in carbon flow in those anaerobic ecosystems. Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA) is anaerobic, moderately thermophilic, peptide-fermenting, Gram-negative bacterium isolated from an anaerobic wool-scouring wastewater treatment lagoon. The cells are straight rods and motile by means of a single flagellum. The optimum pH and temperature range for growth are between 6.6-7.3 and 55-60 degrees Celsius, respectively. The optimum NaCl concentration is 0.08 g/l. A.mobile ferments organic acids (malate, tartrate, pyruvate, glycerol and fumarate) and a few carbohydrates (starch, glucose, fructose and gluconate. Carbohydrates and organic acids are converted to acetate, hydrogen and CO2. It oxidizes leucine to isovalerate with crotonate as an electron acceptor. Thiosulfate, sulfur and cystine are reduced to sulfide and crotonate is reduced to butyrate with glucose as electron donor. This is the type strain (adapted from PMID: 11837298).

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Component representationProteins
Chromosome2004
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Main funding by: National Institutes of Health

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