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Overview

StatusReference proteome
Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome%5Fredundancy">more...</a>)</p> 60,980
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a>. It consists of the characters 'UP' followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000004995
Taxonomy4555 - Setaria italica
Straincv. Yugu1
Last modifiedJanuary 9, 2020
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_000263155.2 from EnsemblPlants full
BuscoC:98.5%[S:78.3%,D:20.1%],F:0.8%,M:0.7%,n:1440
CompletenessClose to Standard

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Component representationProteins
Chromosome VIII4597
Chromosome III7171
Chromosome II7915
Chromosome VI4471
Chromosome IV5247
Chromosome IX10241
Chromosome I6642
Chromosome V8285
Chromosome VII5986
Unassembled WGS sequence513
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Main funding by: National Institutes of Health

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