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Overview

Proteinsi5,128
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000004642
Taxonomy913241 - Salmonella enterica subsp. enterica serovar Alachua str. R6-377
StrainR6-377
Last modifiedFebruary 26, 2018
Genome assembly and annotationi GCA_000231485.2 from ENA/EMBL
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) pan proteome (fasta)

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Unassembled WGS sequence5128

Publications

  1. "Genome sequencing reveals diversification of virulence factor content and possible host adaptation in distinct subpopulations of Salmonella enterica."
    den Bakker H.C., Moreno Switt A.I., Govoni G., Cummings C.A., Ranieri M.L., Degoricija L., Hoelzer K., Rodriguez-Rivera L.D., Brown S., Bolchacova E., Furtado M.R., Wiedmann M.
    BMC Genomics 2011:425-425(2011) [PubMed] [Europe PMC] [Abstract]
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