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Overview

StatusReference proteome
Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome_redundancy">more...</a>)</p> 6,433
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000002697
Taxonomy264198 - Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
StrainJMP134 / LMG 1197
Last modifiedAugust 10, 2019
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_000203875.1 from ENA/EMBL

Cupriavidus necator JMP134 (formerly Ralstonia eutropha JMP134) is able to degrade a large number of chloroaromatic compounds and chemically-related pollutants. In addition to its potential for bioremediation, Ralstonia eutropha is also a model for studying microbial production of polyhydroxyalkanoates and chemolithoautotrophic metabolism in aerobic heterotrophs.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Chromosome 13430
Chromosome 22405
Plasmid megaplasmid Reut511
Plasmid pPJ487

Publications

  1. "The complete multipartite genome sequence of Cupriavidus necator JMP134, a versatile pollutant degrader."
    Lykidis A., Perez-Pantoja D., Ledger T., Mavromatis K., Anderson I.J., Ivanova N.N., Hooper S.D., Lapidus A., Lucas S., Gonzalez B., Kyrpides N.C.
    PLoS ONE 2010:E9729-E9729(2010) [PubMed] [Europe PMC] [Abstract]
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