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Overview

StatusReference proteome
Proteinsi9,647
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000002530
StrainATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100
Last modifiedNovember 9, 2018
Genome assembly and annotationi GCA_000002655.1 from ENA/EMBL
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (Aspergillus fumigatus) pan proteome (fasta)

Neosartorya fumigata (Aspergillus fumigatus) is an airborne fungus, which is thermotolerant up to 70 C allowing it to survive in human habitats and compost heaps, where it has a role in carbon and nitrogen recycling. It is a major allergen and pathogen for immunocompromised humans, causing severe asthma and sinus infections.

The Neosartorya fumigata genome is 29Mb in size. It has 8 chromosomes containing 9,926 predicted protein-coding genes.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Chromosome 11612
Chromosome 21624
Chromosome 31361
Chromosome 41223
Chromosome 51351
Chromosome 61227
Chromosome 7621
Chromosome 8608
Unassembled WGS sequence821
Mitochondrion20

Publications

  1. "Sequencing of mitochondrial genomes of nine Aspergillus and Penicillium species identifies mobile introns and accessory genes as main sources of genome size variability."
    Joardar V., Abrams N.F., Hostetler J., Paukstelis P.J., Pakala S., Pakala S.B., Zafar N., Abolude O.O., Payne G., Andrianopoulos A., Denning D.W., Nierman W.C.
    BMC Genomics 2012:698-698(2012) [PubMed] [Europe PMC] [Abstract]
  2. "Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus."
    Nierman W.C., Pain A., Anderson M.J., Wortman J.R., Kim H.S., Arroyo J., Berriman M., Abe K., Archer D.B., Bermejo C., Bennett J.W., Bowyer P., Chen D., Collins M., Coulsen R., Davies R., Dyer P.S., Farman M.L.
    Denning D.W.
    Nature 2005:1151-1156(2005) [PubMed] [Europe PMC] [Abstract]
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