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Overview

StatusReference proteome
Proteinsi4,587
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000002505
Taxonomy452863 - Pseudarthrobacter chlorophenolicus (strain ATCC 700700 / DSM 12829 / CIP 107037 / JCM 12360 / KCTC 9906 / NCIMB 13794 / A6)
StrainATCC 700700 / DSM 12829 / CIP 107037 / JCM 12360 / KCTC 9906 / NCIMB 13794 / A6
Last modifiedJune 23, 2018
Genome assembly and annotationi GCA_000022025.1 from ENA/EMBL
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Pseudarthrobacter chlorophenolicus (strain ATCC 700700 / DSM 12829 / CIP 107037 / JCM 12360 / KCTC 9906 / NCIMB 13794 / A6) (Arthrobacter chlorophenolicus) pan proteome (fasta)

Arthrobacter chlorophenolicus (strain A6) is a Gram-positive actinobacterium capable of mineralizing several substituted phenols such as 4-chlorophenol (4-CP), 4-nitrophenol (4-NP) and phenol as a sole source of carbon and energy under mesophilic (28 1 degrees Celsius) as well as under psychrophilic (5 1 degrees Celsius) conditions. It was isolated from soil at Fort Collins, Colorado. The strain degrades 4-CP via hydroxyquinol, which is a novel route for aerobic microbial degradation of this compound. The ability of this microorganism to degrade mixtures of compounds at low temperatures makes A. chlorophenolicus a promising inoculant for biodegradation of phenolic compounds under environmental conditions as they occur at polluted sites. (adapted from PubMed 17233723).

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Chromosome3883
Plasmid pACHL01554
Plasmid pACHL02150

Publications

  1. "Complete sequence of plasmid1 of Arthrobacter chlorophenolicus A6."
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Goltsman E., Clum A., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Jansson J., Richardson P.
    Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
  2. "Complete sequence of chromosome of Arthrobacter chlorophenolicus A6."
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Goltsman E., Clum A., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Jansson J., Richardson P.
    Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
  3. "Complete sequence of plasmid2 of Arthrobacter chlorophenolicus A6."
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Goltsman E., Clum A., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Jansson J., Richardson P.
    Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
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