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Overview

StatusReference proteome
Proteinsi4,771
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000002432
Taxonomy204669 - Koribacter versatilis (strain Ellin345)
StrainEllin345
Last modifiedNovember 9, 2018
Genome assembly and annotationi GCA_000014005.1 from ENA/EMBL

Koribacter versatilis strain Ellin345, formerly known as Acidobacteria bacterium (strain Ellin345), is an aerobic, mesophilic, chemo-organotroph Gram-negative bacterium isolated from soil in ryegrass grass/clover pasture in Australia. K.versatilis is able to use a variety of carbon sources that span simple sugars to more complex substrates such as hemicellulose, cellulose, and chitin. It is capable of nitrate and nitrite reduction, but not N2 fixation or denitrification. It plays an important role in iron redox reactions and important contributions to the terrestrial carbon cycle. The presence of cellulose synthesis genes and a large class of novel high-molecular-weight excreted proteins suggests potential traits for desiccation resistance, biofilm formation, and/or contribution to soil structure (adapted from PMID: 19201974).

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Chromosome4771
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Main funding by: National Institutes of Health

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