Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Overview

Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome%5Fredundancy">more...</a>)</p> 4,068
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a>. It consists of the characters 'UP' followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000002380
Taxonomy443144 - Geobacter sp. (strain M21)
StrainM21
Last modifiedApril 2, 2020
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_000023645.1 from ENA/EMBL full
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) pan proteome (fasta)
BuscoC:99.7%[S:99.3%,D:0.3%],F:0%,M:0.3%,n:870

Geobacter sp. (strain M21) is an anaerobic, chemolithotrophic Gram-negative bacterium isolated from an in situ uranium bioremediation experiment in Rifle, Colorado, USA. Bacteria from this genus are of interest because of their novel electron transfer capabilities, impact on the natural environment, their application to the bioremediation of contaminated environments and harvesting electricity from waste organic matter. Geobacter species shown the ability to transfer electrons onto the surface of electrodes, allowing the construction of microbial fuel cells which produce electricity out of waste organic matter. (Adaptated from: www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=20729).

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Component representationProteins
Chromosome4068
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again