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Overview

StatusReference proteome
Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome%5Fredundancy">more...</a>)</p> 23,111
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a>. It consists of the characters 'UP' followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000002356
Taxonomy9940 - Ovis aries
StrainTexel
Last modifiedFebruary 26, 2021
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_000298735.1 from Ensembl full
Buscoi <p>The Benchmarking Universal Single-Copy Ortholog (BUSCO) assessment tool is used, for eukaryotic and bacterial proteomes, to provide quantitative measures of UniProt proteome data completeness in terms of expected gene content. BUSCO scores include percentages of complete (C) single-copy (S) genes, complete (C) duplicated (D) genes, fragmented (F) and missing (F) genes, as well as the total number of orthologous clusters (n) used in the BUSCO assessment.</p> C:94.5%[S:84.2%,D:10.3%],F:2%,M:3.5%,n:13335 cetartiodactyla_odb10
Completenessi <p>Complete Proteome Detector (CPD) is an algorithm which employs statistical evaluation of the completeness and quality of proteomes in UniProt, by looking at the sizes of taxonomically close proteomes. Possible values are 'Standard', 'Close to Standard' and 'Outlier'.</p> Standard

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Component representationProteins
Chromosome 12181
Chromosome 21626
Chromosome 32150
Chromosome 4788
Chromosome 51198
Chromosome 6622
Chromosome 7957
Chromosome 8483
Chromosome 9488
Chromosome 10396
Chromosome 111179
Chromosome 12652
Chromosome 13794
Chromosome 141207
Chromosome 15877
Chromosome 16330
Chromosome 17595
Chromosome 18517
Chromosome 19563
Chromosome 20689
Chromosome 21670
Chromosome 22396
Chromosome 23330
Chromosome 24727
Chromosome 25320
Chromosome 26245
Chromosome X974
Mitochondrion14
Unplaced
1154

Publications

  1. "The complete mitochondrial DNA sequence of the domestic sheep (Ovis aries) and comparison with the other major ovine haplotype."
    Hiendleder S., Lewalski H., Wassmuth R., Janke A.
    J. Mol. Evol. 47:441-448(1998) [PubMed] [Europe PMC] [Abstract]
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