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Overview

StatusReference proteome
Proteinsi6,049
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000002311
Taxonomy559292 - Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
StrainATCC 204508 / S288c
Last modifiedNovember 9, 2018
Genome assembly and annotationi GCA_000146045.2 from ENA/EMBL
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) pan proteome (fasta)

Saccharomyces cerevisiae is a unicellular fungus. It is commonly known as baker's, brewer's or budding yeast. It is used in the production of a number of human foodstuffs, including alcoholic beverages and in the baking industry, and is widely used as a model species in the study of eukaryotic biology. In 1996, the genome of S. cerevisiae was the first eukaryotic genome to be completely deciphered.

The S. cerevisiae genome is about 12.2 Mb with 6,275 genes, compactly organized on 16 chromosomes. Only about 5,800 of these genes are believed to be functional. The genome assembly and the gene model annotation were provided by the Saccharomyces Genome Database (SGD) in 2011.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Chromosome I94
Chromosome II418
Chromosome III168
Chromosome IV769
Chromosome V291
Chromosome VI130
Chromosome VII544
Chromosome VIII293
Chromosome IX215
Chromosome X365
Chromosome XI319
Chromosome XII524
Chromosome XIII470
Chromosome XIV399
Chromosome XV547
Chromosome XVI476
Plasmid 2-micron4
Mitochondrion28

Publications

  1. "Complete nucleotide sequence of Saccharomyces cerevisiae chromosome X."
    Galibert F., Alexandraki D., Baur A., Boles E., Chalwatzis N., Chuat J.-C., Coster F., Cziepluch C., de Haan M., Domdey H., Durand P., Entian K.-D., Gatius M., Goffeau A., Grivell L.A., Hennemann A., Herbert C.J., Heumann K.
    Karpfinger-Hartl L.
    EMBO J. 1996:2031-2049(1996) [PubMed] [Europe PMC] [Abstract]
  2. "The nucleotide sequence of Saccharomyces cerevisiae chromosome XV."
    Dujon B., Albermann K., Aldea M., Alexandraki D., Ansorge W., Arino J., Benes V., Bohn C., Bolotin-Fukuhara M., Bordonne R., Boyer J., Camasses A., Casamayor A., Casas C., Cheret G., Cziepluch C., Daignan-Fornier B., Dang V.-D.
    Kleine K.
    Nature 1997:98-102(1997) [PubMed] [Europe PMC] [Abstract]
  3. "Complete DNA sequence of yeast chromosome XI."
    Dujon B., Alexandraki D., Andre B., Ansorge W., Baladron V., Ballesta J.P.G., Banrevi A., Bolle P.-A., Bolotin-Fukuhara M., Bossier P., Bou G., Boyer J., Buitrago M.J., Cheret G., Colleaux L., Daignan-Fornier B., del Rey F., Dion C.
    Mewes H.-W.
    Nature 1994:371-378(1994) [PubMed] [Europe PMC] [Abstract]
  4. "The nucleotide sequence of Saccharomyces cerevisiae chromosome XVI."
    Bussey H., Storms R.K., Ahmed A., Albermann K., Allen E., Ansorge W., Araujo R., Aparicio A., Barrell B.G., Badcock K., Benes V., Botstein D., Bowman S., Brueckner M., Carpenter J., Cherry J.M., Chung E., Churcher C.M.
    Hani J.
    Nature 1997:103-105(1997) [PubMed] [Europe PMC] [Abstract]
  5. "The nucleotide sequence of Saccharomyces cerevisiae chromosome VII."
    Tettelin H., Agostoni-Carbone M.L., Albermann K., Albers M., Arroyo J., Backes U., Barreiros T., Bertani I., Bjourson A.J., Brueckner M., Bruschi C.V., Carignani G., Castagnoli L., Cerdan E., Clemente M.L., Coblenz A., Coglievina M., Coissac E.
    Kleine K.
    Nature 1997:81-84(1997) [PubMed] [Europe PMC] [Abstract]
  6. "Nucleotide sequence of the yeast plasmid."
    Hartley J.L., Donelson J.E.
    Nature 1980:860-864(1980) [PubMed] [Europe PMC] [Abstract]
  7. "The nucleotide sequence of Saccharomyces cerevisiae chromosome XII."
    Johnston M., Hillier L.W., Riles L., Albermann K., Andre B., Ansorge W., Benes V., Brueckner M., Delius H., Dubois E., Duesterhoeft A., Entian K.-D., Floeth M., Goffeau A., Hebling U., Heumann K., Heuss-Neitzel D., Hilbert H.
    Hoheisel J.D.
    Nature 1997:87-90(1997) [PubMed] [Europe PMC] [Abstract]
  8. "The complete sequence of the mitochondrial genome of Saccharomyces cerevisiae."
    Foury F., Roganti T., Lecrenier N., Purnelle B.
    FEBS Lett. 1998:325-331(1998) [PubMed] [Europe PMC] [Abstract]
  9. "The complete DNA sequence of yeast chromosome III."
    Oliver S.G., van der Aart Q.J.M., Agostoni-Carbone M.L., Aigle M., Alberghina L., Alexandraki D., Antoine G., Anwar R., Ballesta J.P.G., Benit P., Berben G., Bergantino E., Biteau N., Bolle P.-A., Bolotin-Fukuhara M., Brown A., Brown A.J.P., Buhler J.-M.
    Sgouros J.G.
    Nature 1992:38-46(1992) [PubMed] [Europe PMC] [Abstract]
  10. "Complete DNA sequence of yeast chromosome II."
    Feldmann H., Aigle M., Aljinovic G., Andre B., Baclet M.C., Barthe C., Baur A., Becam A.-M., Biteau N., Boles E., Brandt T., Brendel M., Brueckner M., Bussereau F., Christiansen C., Contreras R., Crouzet M., Cziepluch C.
    Kleine K.
    EMBO J. 1994:5795-5809(1994) [PubMed] [Europe PMC] [Abstract]
  11. "The nucleotide sequence of Saccharomyces cerevisiae chromosome IV."
    Jacq C., Alt-Moerbe J., Andre B., Arnold W., Bahr A., Ballesta J.P.G., Bargues M., Baron L., Becker A., Biteau N., Bloecker H., Blugeon C., Boskovic J., Brandt P., Brueckner M., Buitrago M.J., Coster F., Delaveau T.
    Zaccaria P.
    Nature 1997:75-78(1997) [PubMed] [Europe PMC] [Abstract]
  12. "The nucleotide sequence of Saccharomyces cerevisiae chromosome XIV and its evolutionary implications."
    Philippsen P., Kleine K., Poehlmann R., Duesterhoeft A., Hamberg K., Hegemann J.H., Obermaier B., Urrestarazu L.A., Aert R., Albermann K., Altmann R., Andre B., Baladron V., Ballesta J.P.G., Becam A.-M., Beinhauer J.D., Boskovic J., Buitrago M.J.
    Hani J.
    Nature 1997:93-98(1997) [PubMed] [Europe PMC] [Abstract]
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