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Overview

StatusReference proteome
Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome%5Fredundancy">more...</a>)</p> 44,485
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a>. It consists of the characters 'UP' followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000002281
Taxonomy9796 - Equus caballus
StrainThoroughbred
Last modifiedJanuary 9, 2020
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_002863925.1 from Ensembl full
BuscoC:98.7%[S:49.2%,D:49.5%],F:0.8%,M:0.5%,n:6253
CompletenessClose to Standard

The horse is a hoofed, herbivorous mammal belonging to the family Equidae. Domesticated around 6,000 years ago, this animal played an important role in human exploration of novel territories. Nowadays there are more than 300 breeds, developed for various needs in transportation and agriculture. As well as their role in sport and entertainment, horses take part in police work and therapy. The horse is used in biomedical research as a model organism. Horses are known to share with humans more than 90 hereditary diseases, which makes the task of mapping the horse genome significant for veterinary science and medicine.

The horse genome has 32 chromosomes containing 2.7 Gb with 20,000 protein-coding genes. The reference proteome is derived from the genome sequence published in 2009

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Component representationProteins
Chromosome 13428
Chromosome 22331
Chromosome 31920
Chromosome 41628
Chromosome 52228
Chromosome 62080
Chromosome 72593
Chromosome 81774
Chromosome 9947
Chromosome 102183
Chromosome 112243
Chromosome 121265
Chromosome 131383
Chromosome 141444
Chromosome 151494
Chromosome 161607
Chromosome 17712
Chromosome 18983
Chromosome 19910
Chromosome 201353
Chromosome 21789
Chromosome 221113
Chromosome 23701
Chromosome 24950
Chromosome 251111
Chromosome 26477
Chromosome 27510
Chromosome 28877
Chromosome 29457
Chromosome 30418
Chromosome 31329
Chromosome X1642
Mitochondrion13
Unplaced
594
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Main funding by: National Institutes of Health

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