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Overview

StatusReference proteome
Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome%5Fredundancy">more...</a>)</p> 13
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a>. It consists of the characters 'UP' followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000002239
Taxonomy142804 - Rice dwarf virus (isolate Fujian)
StrainIsolate Fujian
Last modifiedMarch 7, 2021
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_000850725.1 from ENA/EMBL full
Completenessi <p>Complete Proteome Detector (CPD) is an algorithm which employs statistical evaluation of the completeness and quality of proteomes in UniProt, by looking at the sizes of taxonomically close proteomes. Possible values are 'Standard', 'Close to Standard' and 'Outlier'.</p> Close to standard (high value)

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Component representationProteins
Genome13

Publications

  1. "Nucleotide sequence of rice dwarf virus genome segment S11 and fuctional analysis of S11 encoded protein."
    Xiao J., Li Y., Quan S., Gu H., Chen Z.
    Chin. J. Biotechnol. 0:0-0(1995)
  2. "Molecular cloning and sequencing of rice dwarf virus segment 10."
    Chu R., Zhang X., Pan N., Chen Z.
    Chin. J. Bot. 35:115-120(1990)
  3. "Nucleotide sequence of rice dwarf phytoreovirus genome segment 2: completion of sequence analyses of rice dwarf virus."
    Uyeda I., Suda N., Yamada N., Kudo H., Murao K., Suga H., Kimura I., Shikata E., Kitagawa Y., Kusano T.et., al
    Intervirology 37:6-11(1994) [PubMed] [Europe PMC] [Abstract]
  4. "cDNA cloning and sequence analysis of rice dwarf virus genome S5."
    Li W., Li Y., Pan N., Chen Z.
    J. Basic Sci. Eng. 2:109-116(1994)
  5. "Molecular cloning and sequencing of the rice dwarf virus genome segment S6."
    Liu Y., Li Y., Pan N., Chen Z.
    Ping Tu Hsueh Pao 10:246-250(1994)
  6. "cDNA synthesis, molecular cloning and sequence analysis of rice dwarf virus segment S12."
    Li Y., Xue Z., Liu Y., Quan S., Pan N., Chen Z.
    Ping Tu Hsueh Pao 10:339-345(1994)
  7. "cDNA cloning and sequence analysis of rice dwarf virus genome segment S9."
    Qu L., Li Y., Zhu Y., Pan N., Chen Z.
    Ping Tu Hsueh Pao 11:270-274(1995)
  8. "Molecular cloning and sequencing of the eighth largest segment of rice dwarf virus and its expression in E. coli."
    Li W., Li Y., Zhang X., Chu R., Chen Z.
    Ping Tu Hsueh Pao 11:56-62(1995)
  9. "Sequence analysis of the rice dwarf phytoreovirus segment S3 transcript encoding for the major structural core protein of 114 kDa."
    Suzuki N., Watanabe Y., Kusano T., Kitagawa Y.
    Virology 179:455-459(1990) [PubMed] [Europe PMC] [Abstract]
  10. "Molecular analysis of rice dwarf phytoreovirus segment S1: interviral homology of the putative RNA-dependent RNA polymerase between plant- and animal-infecting reoviruses."
    Suzuki N., Tanimura M., Watanabe Y., Kusano T., Kitagawa Y., Suda N., Kudo H., Uyeda I., Shikata E.
    Virology 190:240-247(1992) [PubMed] [Europe PMC] [Abstract]
  11. "Sequencing and functional analysis of the deduced protein of rice dwarf virus genome segment S4."
    Zhao X., Li Y., Pan N., Chen Z.
    Zhonghua Wei Sheng Wu Xue He Mian Yi Xue Za Zhi 0:0-0(0)
  12. "cDNA cloning, sequencing of segment 7 of rice dwarf virus genome and its expression in E. coli."
    Qu L., Li Y., Quan S., Ding S., Chen Z.
    Zhonghua Wei Sheng Wu Xue He Mian Yi Xue Za Zhi 0:0-0(0)
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