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Overview

StatusReference proteome
Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome%5Fredundancy">more...</a>)</p> 57,065
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a>. It consists of the characters 'UP' followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000002051
Taxonomy3880 - Medicago truncatula
Straincv. Jemalong A17
Last modifiedDecember 1, 2019
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_000219495.2 from ENA/EMBL full
BuscoC:93.9%[S:72.5%,D:21.4%],F:1.6%,M:4.5%,n:1440
CompletenessStandard

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Component representationProteins
Chromosome 17670
Chromosome 26714
Chromosome 37777
Chromosome 48495
Chromosome 56520
Chromosome 64205
Chromosome 77010
Chromosome 86597
Plastid76
Unassembled WGS sequence2626

Publications

  1. "The Medicago genome provides insight into the evolution of rhizobial symbioses."
    Young N.D., Debelle F., Oldroyd G.E.D., Geurts R., Cannon S.B., Udvardi M.K., Benedito V.A., Mayer K.F.X., Gouzy J., Schoof H., Van de Peer Y., Proost S., Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S., Krishnakumar V.
    Roe B.A.
    Nature 480:520-524(2011) [PubMed] [Europe PMC] [Abstract]
  2. "Medicago truncatula Variety Jema Long A-17 Chloroplast, Complete Sequence."
    Lin S., Wu H., Jia H., Zhang P., Dixon R., May G., Gonzales R., Roe B.A.
    Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases
  3. "Two Distinct Plastid Genome Configurations and Unprecedented Intraspecies Length Variation in the accD Coding Region in Medicago truncatula."
    Gurdon C., Maliga P.
    DNA Res. 0:0-0(2014) [PubMed] [Europe PMC] [Abstract]
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